BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0977.Seq (568 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A0PRR1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0 UniRef50_Q7XEG8 Cluster: Expressed protein; n=4; Oryza sativa|Re... 34 2.0 UniRef50_Q30TX5 Cluster: Polyferredoxin-like; n=1; Thiomicrospir... 33 4.7 UniRef50_Q9GRX3 Cluster: Homeobrain protein; n=3; Sophophora|Rep... 33 4.7 UniRef50_Q8IKF1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7 UniRef50_Q294W6 Cluster: GA12905-PA; n=1; Drosophila pseudoobscu... 33 4.7 UniRef50_Q6C4P6 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 4.7 UniRef50_Q96L96 Cluster: Alpha-protein kinase 3; n=4; Eutheria|R... 33 4.7 UniRef50_UPI00015A4E2A Cluster: Scavenger receptor class B membe... 33 6.2 UniRef50_Q8IB42 Cluster: Putative uncharacterized protein MAL8P1... 33 6.2 UniRef50_Q4Z2I8 Cluster: Putative uncharacterized protein; n=6; ... 33 6.2 UniRef50_A0BXU0 Cluster: Chromosome undetermined scaffold_135, w... 33 6.2 UniRef50_Q6L2U0 Cluster: Transporter; n=2; Thermoplasmatales|Rep... 33 6.2 UniRef50_O44454 Cluster: Serpentine receptor, class z protein 60... 32 8.1 >UniRef50_A0PRR1 Cluster: Putative uncharacterized protein; n=1; Mycobacterium ulcerans Agy99|Rep: Putative uncharacterized protein - Mycobacterium ulcerans (strain Agy99) Length = 244 Score = 34.3 bits (75), Expect = 2.0 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -2 Query: 405 WAPQLHGEFNEVGLASVGMLPSWCGGLMAAHHKLARGWY 289 W LH E LAS G+ +W G A + L RGWY Sbjct: 152 WLQWLHAEHYPALLASPGVAGAWTFGSSTAWNPLPRGWY 190 >UniRef50_Q7XEG8 Cluster: Expressed protein; n=4; Oryza sativa|Rep: Expressed protein - Oryza sativa subsp. japonica (Rice) Length = 191 Score = 34.3 bits (75), Expect = 2.0 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 226 FSGGNFQRFHKILFYDLLPSLVPPPRQFVMSSHQPTTPRRQ 348 F G N + FH + LLPS PPP + SS +P TP++Q Sbjct: 38 FRGMNCRSFHSGVCAGLLPSPPPPPAR-TYSSPEPKTPKQQ 77 >UniRef50_Q30TX5 Cluster: Polyferredoxin-like; n=1; Thiomicrospira denitrificans ATCC 33889|Rep: Polyferredoxin-like - Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1351) Length = 918 Score = 33.1 bits (72), Expect = 4.7 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = +2 Query: 83 KYYNNHRLTRTTSKYSANVVN*ITGVIKFIFETVRPFYCFLNLLHTTVFQEVIFSVSTKY 262 KY + L +T K+ N GV+ +F +Y F NL T ++F+V T Sbjct: 92 KYITKYGLKKTMPKWMQNRY---IGVLLLVFGWWGVYYMFPNLFRTAQGTAILFTVMTII 148 Query: 263 FFTIYY 280 F IY+ Sbjct: 149 AFVIYF 154 >UniRef50_Q9GRX3 Cluster: Homeobrain protein; n=3; Sophophora|Rep: Homeobrain protein - Drosophila melanogaster (Fruit fly) Length = 409 Score = 33.1 bits (72), Expect = 4.7 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -2 Query: 423 AFEGKFWAPQ--LHGEFNEVGLASVGMLPSWCGGLMAAHHKL 304 + + +FW P LH FN A+ G+LP LMA H+KL Sbjct: 249 SMQSEFWPPHFALHQHFNPAAAAAAGLLPQ---HLMAPHYKL 287 >UniRef50_Q8IKF1 Cluster: Putative uncharacterized protein; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7) Length = 1837 Score = 33.1 bits (72), Expect = 4.7 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%) Frame = +2 Query: 62 IYTLYTRK--YYNNHRLTRTTSKYSANVVN*ITGVIKFIFETVRPFYCFLNLLHTTVFQE 235 IYT +K N + + K N I +K + TV C L++ + + Sbjct: 709 IYTGIDKKSNIINQNNKIKEKRKNDILFFNDINYKMKILLLTVISINCILSINEQNILDQ 768 Query: 236 VIFSVSTKYFFTIYYHL 286 IF + KYFF + +HL Sbjct: 769 NIFLIYIKYFFLLLFHL 785 >UniRef50_Q294W6 Cluster: GA12905-PA; n=1; Drosophila pseudoobscura|Rep: GA12905-PA - Drosophila pseudoobscura (Fruit fly) Length = 1325 Score = 33.1 bits (72), Expect = 4.7 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 280 PSLVPPPRQFVMSSHQPTTPRRQ----HPHGCQADLIELTMKLWCPKLSFEGVNSTNSNN 447 P VPP + SS +P R+ HP A ++ CP SFEG N+ N+ N Sbjct: 304 PPPVPPKPRVCSSSDEPALKTRRLVCPHPRIYPAPHGSCCVRKGCPPYSFEG-NNNNNYN 362 Query: 448 CR 453 C+ Sbjct: 363 CK 364 >UniRef50_Q6C4P6 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep: Similarity - Yarrowia lipolytica (Candida lipolytica) Length = 845 Score = 33.1 bits (72), Expect = 4.7 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 271 DLLPSLVPPPRQFVMSSHQPTTPRRQHPHG 360 D P VPPP F+M + Q TPR+ H G Sbjct: 757 DNSPPSVPPPMPFMMQNKQRQTPRKYHKKG 786 >UniRef50_Q96L96 Cluster: Alpha-protein kinase 3; n=4; Eutheria|Rep: Alpha-protein kinase 3 - Homo sapiens (Human) Length = 1907 Score = 33.1 bits (72), Expect = 4.7 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%) Frame = +2 Query: 326 SPPHHEGNIPTDAKP-TSLNSP*SCGAQNF---PSKASIQQIPT 445 +PP +G TD+KP +SL+ CGAQ+ P +AS+ Q+PT Sbjct: 686 APPKPKGEATTDSKPISSLSQAPECGAQSLGKAPPQASV-QVPT 728 >UniRef50_UPI00015A4E2A Cluster: Scavenger receptor class B member 1 (SRB1) (SR-BI) (CD36 antigen-like 1) (CD36 and LIMPII analogous 1) (CLA-1) (Collagen type I receptor, thrombospondin receptor-like 1).; n=3; Danio rerio|Rep: Scavenger receptor class B member 1 (SRB1) (SR-BI) (CD36 antigen-like 1) (CD36 and LIMPII analogous 1) (CLA-1) (Collagen type I receptor, thrombospondin receptor-like 1). - Danio rerio Length = 459 Score = 32.7 bits (71), Expect = 6.2 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Frame = +2 Query: 176 ETVRPFY----CFLNLLHTTVFQEVIFSVSTKYFFTIYYHLWYH 295 ET PFY C LL ++F + FS YFF + YHL+ H Sbjct: 227 ETTMPFYSPDACRSFLLFYSLFCPLYFSSLPHYFFLVTYHLFSH 270 >UniRef50_Q8IB42 Cluster: Putative uncharacterized protein MAL8P1.55; n=2; Plasmodium|Rep: Putative uncharacterized protein MAL8P1.55 - Plasmodium falciparum (isolate 3D7) Length = 816 Score = 32.7 bits (71), Expect = 6.2 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = +1 Query: 217 YYCFSGGN-FQRFHKILFYDLLPSLVPPPRQFVMSSHQPTTPRRQHPH--GCQADLIELT 387 Y+C G N F+ K LF+D + + + +S +PRR+H H G + D Sbjct: 734 YFCEWGYNTFEEKQKALFHDKIKTFQMSYKLIFLSCTLQNSPRRKHTHGKGLETDFYSKF 793 Query: 388 MKLWC 402 M +C Sbjct: 794 MHKYC 798 >UniRef50_Q4Z2I8 Cluster: Putative uncharacterized protein; n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei Length = 1460 Score = 32.7 bits (71), Expect = 6.2 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 53 NNNIYTLYTRKYYNNHRLTRTTSKYSANVVN*ITGVIKFI-FETVRPFYCFLNLLHTTVF 229 NN IY + R Y N ++ + T KY N+ N I ++ F+ + RP+ N+ + T Sbjct: 995 NNIIYIITQRDIYYNKQVIKNT-KYKENITNIIKRLLYFVLLASARPYDTNSNIKNDTCL 1053 Query: 230 QE 235 E Sbjct: 1054 NE 1055 >UniRef50_A0BXU0 Cluster: Chromosome undetermined scaffold_135, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_135, whole genome shotgun sequence - Paramecium tetraurelia Length = 1451 Score = 32.7 bits (71), Expect = 6.2 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%) Frame = +2 Query: 17 LKFMYLQQIQ*HNNNIYTLYTRKYYNNHRLTRTTSKYSANVV--N*ITGV-IKFIFETVR 187 +K++ L Q Q NNN++ L +KY N K++ + N + V IK IFE Sbjct: 1206 VKYLLLNQFQDLNNNVFYLLVQKYKNKDNTQFDVDKFTETQISQNILDKVPIKDIFENEI 1265 Query: 188 PFYCFLNLLHTTVFQEVIFSVSTKYFFTIYYHL 286 + +E+I+ K F+ IYY + Sbjct: 1266 NKILNSQIYIDDDLEEMIYE-QFKMFWEIYYEI 1297 >UniRef50_Q6L2U0 Cluster: Transporter; n=2; Thermoplasmatales|Rep: Transporter - Picrophilus torridus Length = 424 Score = 32.7 bits (71), Expect = 6.2 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +1 Query: 169 HF*NR*TFLLFPKLTTYYCFSGGNFQRFHKI--LFYDLLPSLVPPP 300 HF N FLLFP L TYY F G F I + Y+LL L+ P Sbjct: 23 HFTNDGNFLLFPTLITYYKFIPGVSITFLGIMAIVYNLLSGLLGTP 68 >UniRef50_O44454 Cluster: Serpentine receptor, class z protein 60; n=1; Caenorhabditis elegans|Rep: Serpentine receptor, class z protein 60 - Caenorhabditis elegans Length = 313 Score = 32.3 bits (70), Expect = 8.1 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 134 NVVN*ITGVIKFIFETVRPFYCFLNLLHTTVFQEVIFSVSTKYFF 268 N N ITG+I I+ + PFY ++N + Q V+ TK+FF Sbjct: 19 NGSNLITGIIILIYFLLFPFYVYVNKANRKRDQAVLIYPFTKHFF 63 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 551,814,058 Number of Sequences: 1657284 Number of extensions: 11640640 Number of successful extensions: 31552 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 30159 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 31512 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 38321472724 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -