Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0977.Seq
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro...    33   0.70 
AK125667-1|BAC86237.1|  324|Homo sapiens protein ( Homo sapiens ...    30   6.5  

>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
           protein.
          Length = 1907

 Score = 33.1 bits (72), Expect = 0.70
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
 Frame = +2

Query: 326 SPPHHEGNIPTDAKP-TSLNSP*SCGAQNF---PSKASIQQIPT 445
           +PP  +G   TD+KP +SL+    CGAQ+    P +AS+ Q+PT
Sbjct: 686 APPKPKGEATTDSKPISSLSQAPECGAQSLGKAPPQASV-QVPT 728


>AK125667-1|BAC86237.1|  324|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43679 fis, clone TBAES2001171. ).
          Length = 324

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = -3

Query: 377 MRSAWHPWGCCLRGVVG---*WLLITNWR 300
           M S WHPW  C  G+      WL  T+WR
Sbjct: 202 MPSGWHPWPRCWPGLASLAVNWLRRTSWR 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,432,825
Number of Sequences: 237096
Number of extensions: 1770520
Number of successful extensions: 3270
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)