BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0977.Seq (568 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine re... 32 0.25 Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 5.4 Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 5.4 L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 5.4 AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 27 7.1 AF036690-1|AAB88323.1| 151|Caenorhabditis elegans Hypothetical ... 27 7.1 Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 27 9.4 Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 27 9.4 U39646-8|AAA80372.2| 336|Caenorhabditis elegans Hypothetical pr... 27 9.4 AF101312-2|AAC69222.2| 475|Caenorhabditis elegans Hypothetical ... 27 9.4 AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 27 9.4 >AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine receptor, class z protein60 protein. Length = 313 Score = 32.3 bits (70), Expect = 0.25 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 134 NVVN*ITGVIKFIFETVRPFYCFLNLLHTTVFQEVIFSVSTKYFF 268 N N ITG+I I+ + PFY ++N + Q V+ TK+FF Sbjct: 19 NGSNLITGIIILIYFLLFPFYVYVNKANRKRDQAVLIYPFTKHFF 63 >Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein ZC101.2f protein. Length = 2389 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1577 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1613 >Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein ZC101.2e protein. Length = 3375 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1670 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1706 >Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein ZC101.2a protein. Length = 2482 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1670 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1706 >Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein ZC101.2f protein. Length = 2389 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1577 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1613 >Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein ZC101.2e protein. Length = 3375 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1670 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1706 >Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein ZC101.2a protein. Length = 2482 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1670 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1706 >L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane proteoglycan protein. Length = 2481 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T API + H T A P++ +RP H V+ P+T Sbjct: 1669 TGAPIDSTPATVHVTNAAAPPQVEARP--PQHPVITPQT 1705 >AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical protein W10G11.5 protein. Length = 345 Score = 27.5 bits (58), Expect = 7.1 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +3 Query: 261 TFLRSTTIFGTTPAPICDEQPSAHHTTKATSPRMPSRPH*THHEVVVPKT 410 T L STT TP PI + TT T+ +P+ TH V T Sbjct: 76 TTLSSTTASTVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTT 125 >AF036690-1|AAB88323.1| 151|Caenorhabditis elegans Hypothetical protein F09C11.1 protein. Length = 151 Score = 27.5 bits (58), Expect = 7.1 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +2 Query: 101 RLTRTTSKYSANVVN*ITGVIKFIFETVRPFYCFLNLLHT--TVFQEVIFSVSTKYFF 268 R TR +S+ + N N +F +T F+CFLN++ T+ F + KY+F Sbjct: 66 RKTRLSSENTKNNEN--LEKKQFFLKTENQFFCFLNIVFKKFTICSVNNFQYNKKYYF 121 >Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical protein C02F4.1 protein. Length = 1781 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 333 HTTKATSPRMPSRPH*THHEVVVPKTFLRRRQF 431 H + S R H HHE +PKTF R+ + Sbjct: 283 HVSPIESSNATMRKH-GHHEATIPKTFYCRQSY 314 >Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein C02F4.1 protein. Length = 1781 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 333 HTTKATSPRMPSRPH*THHEVVVPKTFLRRRQF 431 H + S R H HHE +PKTF R+ + Sbjct: 283 HVSPIESSNATMRKH-GHHEATIPKTFYCRQSY 314 >U39646-8|AAA80372.2| 336|Caenorhabditis elegans Hypothetical protein F47B7.7 protein. Length = 336 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 294 TPAPICDEQPSAHHTTKATSPRMPSR 371 +P+P DE + H T+A SPR SR Sbjct: 200 SPSPTGDEPQAIPHRTQALSPRPASR 225 >AF101312-2|AAC69222.2| 475|Caenorhabditis elegans Hypothetical protein F56E10.3 protein. Length = 475 Score = 27.1 bits (57), Expect = 9.4 Identities = 9/23 (39%), Positives = 17/23 (73%) Frame = +2 Query: 194 YCFLNLLHTTVFQEVIFSVSTKY 262 +CFL++ + +FQE ++S +T Y Sbjct: 169 FCFLSVYISRIFQENLYSTTTTY 191 >AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. Length = 1781 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 333 HTTKATSPRMPSRPH*THHEVVVPKTFLRRRQF 431 H + S R H HHE +PKTF R+ + Sbjct: 283 HVSPIESSNATMRKH-GHHEATIPKTFYCRQSY 314 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,917,017 Number of Sequences: 27780 Number of extensions: 282649 Number of successful extensions: 792 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 792 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1176726318 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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