Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0977.Seq
(568 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.8
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 3.7
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 3.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.6
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 410 FP-SKASIQQIPTIVENYLLILQTSMHVNFNI 502
FP K + ++PT++ NY+ ++ +N N+
Sbjct: 887 FPFDKHILDKLPTLISNYIEAVKEGKFMNVNM 918
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 264 KYFVETLKITS*KTVVCSKFRKQ*KGLTVSKMNL 163
K+F +T+ K +V + + GL +S+MNL
Sbjct: 264 KHFTIQSSVTTSKMMVSPRLYDRQNGLVLSRMNL 297
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYNNHRLTRTTSKYSANVVN 145
HNNN Y YNN+ + K N++N
Sbjct: 90 HNNNYKYNYNNNNYNNNNYNK---KLYYNIIN 118
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYNNHRLTRTTSKYSANVVN 145
HNNN Y YNN+ + K N++N
Sbjct: 90 HNNNYKYNYNNNNYNNNNYNK---KLYYNIIN 118
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 96 YNNNNYNNYKKLYYN 110
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 106 YNNNNYNNYKKLYYN 120
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 341 YNNNNYNNYKKLYYN 355
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYN 94
+NNN Y Y + YYN
Sbjct: 98 NNNNNYNNYKKLYYN 112
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 131 ANVVN*ITGVIKFIFETVR 187
A VV + G++ + F+TVR
Sbjct: 219 AQVVTTVAGIVSYPFDTVR 237
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 131 ANVVN*ITGVIKFIFETVR 187
A VV + G++ + F+TVR
Sbjct: 219 AQVVTTVAGIVSYPFDTVR 237
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 427 NSTNSNNCRKLPSDFTNI 480
N+ +NNC+KL + NI
Sbjct: 344 NNNYNNNCKKLYYNIINI 361
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYNNHR 103
+NNN Y Y NN++
Sbjct: 97 YNNNYNNNYNNNYNNNYK 114
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 50 HNNNIYTLYTRKYYNNHR 103
+NNN Y Y NN++
Sbjct: 97 YNNNYNNNYNNNYNNNYK 114
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,368
Number of Sequences: 438
Number of extensions: 3781
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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