BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0977.Seq (568 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.6 DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.1 DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.1 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.1 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.1 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.1 DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.8 DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.8 DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.8 DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.8 DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.8 DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.8 DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.8 DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.8 AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 3.7 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 3.7 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.5 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.6 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.6 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.4 bits (48), Expect = 1.6 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +2 Query: 410 FP-SKASIQQIPTIVENYLLILQTSMHVNFNI 502 FP K + ++PT++ NY+ ++ +N N+ Sbjct: 887 FPFDKHILDKLPTLISNYIEAVKEGKFMNVNM 918 Score = 23.0 bits (47), Expect = 2.1 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 264 KYFVETLKITS*KTVVCSKFRKQ*KGLTVSKMNL 163 K+F +T+ K +V + + GL +S+MNL Sbjct: 264 KHFTIQSSVTTSKMMVSPRLYDRQNGLVLSRMNL 297 >DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 23.0 bits (47), Expect = 2.1 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +2 Query: 50 HNNNIYTLYTRKYYNNHRLTRTTSKYSANVVN 145 HNNN Y YNN+ + K N++N Sbjct: 90 HNNNYKYNYNNNNYNNNNYNK---KLYYNIIN 118 >DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 23.0 bits (47), Expect = 2.1 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +2 Query: 50 HNNNIYTLYTRKYYNNHRLTRTTSKYSANVVN 145 HNNN Y YNN+ + K N++N Sbjct: 90 HNNNYKYNYNNNNYNNNNYNK---KLYYNIIN 118 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 23.0 bits (47), Expect = 2.1 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 96 YNNNNYNNYKKLYYN 110 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 23.0 bits (47), Expect = 2.1 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 106 YNNNNYNNYKKLYYN 120 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 23.0 bits (47), Expect = 2.1 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 341 YNNNNYNNYKKLYYN 355 >DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex determiner protein. Length = 182 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 50 HNNNIYTLYTRKYYN 94 +NNN Y Y + YYN Sbjct: 98 NNNNNYNNYKKLYYN 112 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 22.2 bits (45), Expect = 3.7 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +2 Query: 131 ANVVN*ITGVIKFIFETVR 187 A VV + G++ + F+TVR Sbjct: 219 AQVVTTVAGIVSYPFDTVR 237 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 22.2 bits (45), Expect = 3.7 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +2 Query: 131 ANVVN*ITGVIKFIFETVR 187 A VV + G++ + F+TVR Sbjct: 219 AQVVTTVAGIVSYPFDTVR 237 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.4 bits (43), Expect = 6.5 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +1 Query: 427 NSTNSNNCRKLPSDFTNI 480 N+ +NNC+KL + NI Sbjct: 344 NNNYNNNCKKLYYNIINI 361 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 8.6 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +2 Query: 50 HNNNIYTLYTRKYYNNHR 103 +NNN Y Y NN++ Sbjct: 97 YNNNYNNNYNNNYNNNYK 114 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 8.6 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +2 Query: 50 HNNNIYTLYTRKYYNNHR 103 +NNN Y Y NN++ Sbjct: 97 YNNNYNNNYNNNYNNNYK 114 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 163,368 Number of Sequences: 438 Number of extensions: 3781 Number of successful extensions: 20 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 16440594 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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