Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0976.Seq
(557 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SQY3 Cluster: Predicted protein; n=3; Nematostella ve... 42 0.013
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 38 0.21
UniRef50_O02751 Cluster: Craniofacial development protein 2; n=7... 37 0.28
UniRef50_UPI0000E4635B Cluster: PREDICTED: similar to bucentaur;... 37 0.37
UniRef50_Q4SRL7 Cluster: Chromosome undetermined SCAF14518, whol... 37 0.37
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 35 1.1
UniRef50_UPI0000E48996 Cluster: PREDICTED: similar to bucentaur;... 33 3.4
UniRef50_Q9H5G9 Cluster: CDNA: FLJ23447 fis, clone HSI03346; n=2... 33 3.4
UniRef50_A6QPM7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_O34836 Cluster: Uncharacterized protein yflC; n=1; Baci... 33 4.5
UniRef50_UPI0000E4A0E6 Cluster: PREDICTED: similar to endonuclea... 33 6.0
UniRef50_UPI0000F2C83F Cluster: PREDICTED: similar to Ferritin, ... 32 7.9
UniRef50_UPI0000F3183E Cluster: UPI0000F3183E related cluster; n... 32 7.9
>UniRef50_A7SQY3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 277
Score = 41.5 bits (93), Expect = 0.013
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Frame = +2
Query: 164 TKTSIRAHHP--IGTW--KRCH*AREIKHCGTGDESHDISILGIGETHMRRIGHFKTASG 331
TK + H IG W + + + + DI I+GI ETH G + G
Sbjct: 15 TKPLVHPKHAMRIGNWNVRTLYSSGNVAQAAREMGKRDIDIMGISETHWTGQGKMQLRDG 74
Query: 332 NTMYFSGLDDS-SLHGVGFIMS----AKMNQQVPWLQSSLRVHHKYQIKHQALHA*HPAS 496
TM +SG +D+ GVG +MS A + + PW + ++ ++ +H L H
Sbjct: 75 ETMVYSGREDNIHREGVGILMSKNAAACLIEWTPWNERMIQA--RFYSRHIQLTIIH--- 129
Query: 497 ICFHSASSDEDI-ENFYGTLK 556
I + +DE + + FY L+
Sbjct: 130 IYAPTEDADEHLKDEFYTRLQ 150
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 37.5 bits (83), Expect = 0.21
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Frame = +2
Query: 260 HDISILGIGETHMRRIGHFKTASGNTMYFSGLDDSS---LHGVGFIMSAK-MNQQVPWLQ 427
+++ +LGI ETH ++G + +SG + +SG ++ + GV ++S K N + W
Sbjct: 39 YNLEVLGISETHWTQVGQQRLSSGELLLYSGHEEENAPHTQGVALMLSRKAQNALIGWES 98
Query: 428 SSLR-VHHKYQIKHQALHA*HPASICFHSASS-DEDIEN-FYGTLK 556
R + ++ K + + C+ + DED +N FY L+
Sbjct: 99 HGPRIIKASFKTKREGITM--NIIQCYAPTNDYDEDAKNQFYDRLQ 142
>UniRef50_O02751 Cluster: Craniofacial development protein 2; n=70;
Eutheria|Rep: Craniofacial development protein 2 - Bos
taurus (Bovine)
Length = 592
Score = 37.1 bits (82), Expect = 0.28
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 384 LLCQQR*INKFLGCNPVSECIISIKLNTKPCTLNILQVYAST 509
L+ +R N +GCN ++ +IS++ KP L ++QVYA T
Sbjct: 308 LIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPT 349
>UniRef50_UPI0000E4635B Cluster: PREDICTED: similar to bucentaur;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to bucentaur - Strongylocentrotus purpuratus
Length = 359
Score = 36.7 bits (81), Expect = 0.37
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 260 HDISILGIGETHMRRIGHFKTASGNTMYFSGLDDS-SLHGVGFIM 391
+DI +LGI E+ G F + GNT+ FSG + GVGFI+
Sbjct: 37 NDIKVLGISESWWLGQGRFTSDEGNTIIFSGKESGRKRRGVGFII 81
Score = 35.5 bits (78), Expect = 0.85
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 417 LGCNPVSECIISIKLNTKPCTLNILQVYAST 509
LG NP++E I++++L P ++I+QVYA T
Sbjct: 90 LGYNPINERIMTVRLQGHPMNISIIQVYAPT 120
>UniRef50_Q4SRL7 Cluster: Chromosome undetermined SCAF14518, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14518, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 304
Score = 36.7 bits (81), Expect = 0.37
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 317 KTASGNTMYFSGLDDSSLHGVGFIMSAKMNQQVPWLQSSLRVHHKYQIKHQALHA*HPAS 496
+T S N F + S H F +A N++ W+Q R Y +++ +
Sbjct: 100 ETTSSNVFPFKIVHFSKKHRTWFFSAASENERRKWMQYLRREIDHYNDRYELYNC----P 155
Query: 497 ICFHSASSDEDIENFYGTLK 556
IC S+ SD D ++FYGT++
Sbjct: 156 ICL-SSCSDSDEDSFYGTIE 174
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 35.1 bits (77), Expect = 1.1
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +2
Query: 272 ILGIGETHMRRIGHFKTASGNTMYFSGLDDSSLHGVGFIMS-AKMNQQVPWLQSSLR-VH 445
I+GI ETH +G F T G+ + SG D GV I++ N + + S R +
Sbjct: 91 IIGIAETHWTDMGDF-THDGHRILCSGKDKIHREGVALILNKTAQNALLGYNPISPRIIS 149
Query: 446 HKYQIKHQALHA*HPASICFHSASSDEDIENFYGTLK 556
+++I+ +L + ++A+S+E+IE FY L+
Sbjct: 150 ARFEIQTGSLTIIQVYAP--NTANSEEEIEEFYNLLQ 184
>UniRef50_UPI0000E48996 Cluster: PREDICTED: similar to bucentaur;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to bucentaur - Strongylocentrotus purpuratus
Length = 426
Score = 33.5 bits (73), Expect = 3.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYAST 509
PVSE I+ ++L KP L I+QVYA T
Sbjct: 135 PVSERIVMVRLKAKPKHLTIIQVYAPT 161
>UniRef50_Q9H5G9 Cluster: CDNA: FLJ23447 fis, clone HSI03346; n=2;
Homo sapiens|Rep: CDNA: FLJ23447 fis, clone HSI03346 -
Homo sapiens (Human)
Length = 363
Score = 33.5 bits (73), Expect = 3.4
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -3
Query: 387 IKPTPCRLESSRPEKYMVFPEAVLKCPILRICVSPMPKILMS*DSSPVPQCLIS 226
+ +PCR SSR M P +V P S PK ++ SSP P C S
Sbjct: 16 LSTSPCRTTSSRNSPTMSCPASVACEPSTSTTTSSPPKACLTRPSSPSPSCSTS 69
>UniRef50_A6QPM7 Cluster: Putative uncharacterized protein; n=1; Bos
taurus|Rep: Putative uncharacterized protein - Bos
taurus (Bovine)
Length = 272
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 408 NKFLGCNPVSECIISIKLNTKPCTLNILQVYAST 509
N LGCN ++ +IS++ KP + I+QV+A T
Sbjct: 230 NALLGCNLKNDRMISVRFQGKPFNIMIIQVFALT 263
>UniRef50_O34836 Cluster: Uncharacterized protein yflC; n=1;
Bacillus subtilis|Rep: Uncharacterized protein yflC -
Bacillus subtilis
Length = 50
Score = 33.1 bits (72), Expect = 4.5
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -2
Query: 313 MSDSSHMCLADAQNTNVVRFISRSTMLNFPGLMTPLPGANRMMCSYRCFGAICF 152
M D SH+ D + R I N PG+ PLP R C RC AI F
Sbjct: 1 MMDFSHIVSED----KIKRAIKDGDFQNLPGMGKPLPKMTRHTCRNRCAWAIVF 50
>UniRef50_UPI0000E4A0E6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 647
Score = 32.7 bits (71), Expect = 6.0
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +2
Query: 260 HDISILGIGETHMRRIGHFKTASGNTMYFSGLDDS-SLHGVGFIMSAKMNQQVPWLQSSL 436
+++ ILG+ E+ G KT +G T+ +SG DD+ GV I+ + + + ++
Sbjct: 293 YNLHILGVSESGWTGSGSIKTNTGETVLYSGRDDNHHSEGVATILKKGVEKCLMEVKPIN 352
Query: 437 RVHHKYQIKHQALHA*HPASICFHSASSDEDIENFYGTLK 556
K ++K + ++ + S DE + FY L+
Sbjct: 353 SRLMKIRLKGKQINTTITQCYAPSNDSDDEAKDKFYDQLQ 392
>UniRef50_UPI0000F2C83F Cluster: PREDICTED: similar to Ferritin,
heavy polypeptide 1; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Ferritin, heavy polypeptide 1 -
Monodelphis domestica
Length = 268
Score = 32.3 bits (70), Expect = 7.9
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -1
Query: 557 LSMSHRNFLYLHQKTQSGSIYLQDVKRARLGV*FDTYDAL*DWIAAKELVDSSLLT**NP 378
+ + + FLYLH++ G I L D+K+ + + DAL + ++ V S+L
Sbjct: 57 IEQAEKLFLYLHRR--GGHISLYDIKKPEMSEWAGSLDALASSLEVEKFVKQSML----D 110
Query: 377 LHAD*NHPDQRNTWYF 330
LH NT+YF
Sbjct: 111 LHRVARRNSDPNTYYF 126
>UniRef50_UPI0000F3183E Cluster: UPI0000F3183E related cluster; n=4;
Bos taurus|Rep: UPI0000F3183E UniRef100 entry - Bos
Taurus
Length = 374
Score = 32.3 bits (70), Expect = 7.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 384 LLCQQR*INKFLGCNPVSECIISIKLNTKPCTLNILQVYAST 509
++ +R N LGC+ ++ IS++ KP + ++QVYA T
Sbjct: 17 IMVNKRVRNAVLGCDLKNDRRISVRFQGKPFNITVIQVYAPT 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,990,355
Number of Sequences: 1657284
Number of extensions: 12477398
Number of successful extensions: 27800
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27791
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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