Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0976.Seq
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37024| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_41411| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 36 0.022
SB_29935| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-06) 36 0.030
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 35 0.052
SB_5802| Best HMM Match : HWE_HK (HMM E-Value=6.3) 31 0.84
SB_38780| Best HMM Match : Astacin (HMM E-Value=0) 30 1.1
SB_36785| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_16938| Best HMM Match : Exo_endo_phos (HMM E-Value=2.7e-08) 30 1.1
SB_7575| Best HMM Match : Exo_endo_phos (HMM E-Value=3.4e-12) 30 1.1
SB_56675| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-08) 30 1.1
SB_52006| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_12357| Best HMM Match : RVT_1 (HMM E-Value=7.69999e-41) 30 1.1
SB_35047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 29 2.6
SB_55478| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_23379| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_46161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_5911| Best HMM Match : Exo_endo_phos (HMM E-Value=0.011) 28 5.9
SB_20793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_37024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 263 DISILGIGETHMRRIGHFKTASGNTMYFSGLDDS-SLHGVGFIMS 394
DI I+GI ETH G + G TM +SG +D+ GVG +MS
Sbjct: 5 DIDIMGISETHWTGQGKMQLRDGETMVYSGREDNIHREGVGILMS 49
>SB_41411| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 647
Score = 35.9 bits (79), Expect = 0.022
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +2
Query: 164 TKTSIRAHHP--IGTW--KRCH*AREIKHCGTGDESHDISILGIGETHMRRIGHFKTASG 331
TK + H IG W + + + + DI I+GI ET+ G + G
Sbjct: 63 TKPLVHPKHAMRIGNWNVRTLYSSGNVAQAAREMGKRDIDIMGISETYWTGQGKTQLRDG 122
Query: 332 NTMYFSGLDDS-SLHGVGFIMS----AKMNQQVPW 421
TM +SG +D+ GVG ++S A + + PW
Sbjct: 123 ETMVYSGREDNIHREGVGILVSKNVAACLIEWTPW 157
>SB_29935| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-06)
Length = 353
Score = 35.5 bits (78), Expect = 0.030
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Frame = +2
Query: 164 TKTSIRAHHP--IGTW--KRCH*AREIKHCGTGDESHDISILGIGETHMRRIGHFKTASG 331
TK + H IG W + + + + DI + I ETH G G
Sbjct: 63 TKPLVHPKHAMRIGNWNVRTLYSSGNVNQAAREMGKRDIDFMEISETHWTGQGKMHRRDG 122
Query: 332 NTMYFSGLDDS-SLHGVGFIMS----AKMNQQVPWLQSSLRVH-HKYQIKHQALH 478
T+ +SG +D+ GVG +MS A + + PW + ++ + IK +H
Sbjct: 123 ETLVYSGREDNIHREGVGILMSKNVAACLIEWTPWNERMIQARFYSRHIKLTIIH 177
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 34.7 bits (76), Expect = 0.052
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 272 ILGIGETHMRRIGHFKTASGNTMYFSGLDDSSLHGVGFIMSAK-MNQQVPWLQSSLR-VH 445
ILGI E G +T+ G+ + +SG D + +GV I++ K +N + W S R +
Sbjct: 26 ILGISECRWTGSGRQRTSDGSVILYSGNDTTHTNGVALIVAKKYVNTLLEWEPISDRLLR 85
Query: 446 HKYQIKH 466
++ KH
Sbjct: 86 ARFDSKH 92
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 384 LLCQQR*INKFLGCNPVSECIISIKLNTKPCTLNILQVYAST 509
L+ ++ +N L P+S+ ++ + ++K C L I+Q YA T
Sbjct: 63 LIVAKKYVNTLLEWEPISDRLLRARFDSKHCKLTIIQCYAPT 104
>SB_5802| Best HMM Match : HWE_HK (HMM E-Value=6.3)
Length = 166
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Frame = +2
Query: 263 DISILGIGETHMRRIGHFKTASGNTMYFSG---LDDSSLHGVGFIMSAKMNQQ-VPWLQS 430
++++LGI E+ G + SG + +SG D + +HGV ++S + + W
Sbjct: 51 NLTVLGISESRWTGSGQKRLTSGELLLYSGHEQEDAAHIHGVALMLSKSAQRALIGWEAH 110
Query: 431 SLRV-HHKYQIKHQALHA*HPASICFHSASSDEDIENFYGTL 553
R+ + K + ++ + S +E+ +NFY L
Sbjct: 111 GPRIMTASFYTKKKRINMDIIQCYAPTNDSEEEEKDNFYNRL 152
>SB_38780| Best HMM Match : Astacin (HMM E-Value=0)
Length = 1153
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 202 PISERLMLMKLKTDDGTTNLLAVYAPTL 229
>SB_36785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 85 PISERLMLMKLKTDDGTTNLLAVYAPTL 112
>SB_16938| Best HMM Match : Exo_endo_phos (HMM E-Value=2.7e-08)
Length = 554
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 85 PISERLMLMKLKTDDGTTNLLAVYAPTL 112
>SB_7575| Best HMM Match : Exo_endo_phos (HMM E-Value=3.4e-12)
Length = 548
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 189 PISERLMLMKLKTDDGTTNLLAVYAPTL 216
>SB_56675| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-08)
Length = 545
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 85 PISERLMLMKLKTDDGTTNLLAVYAPTL 112
>SB_52006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 85 PISERLMLMKLKTDDGTTNLLAVYAPTL 112
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 1655 PISERLMLMKLKTDDGTTNLLAVYAPTL 1682
>SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 85 PISERLMLMKLKTDDGTTNLLAVYAPTL 112
>SB_12357| Best HMM Match : RVT_1 (HMM E-Value=7.69999e-41)
Length = 889
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYASTL 512
P+SE ++ +KL T T N+L VYA TL
Sbjct: 131 PISERLMLMKLKTDDGTTNLLAVYAPTL 158
>SB_35047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 261 TTLVFWASARHICEESDISRQ--LREIPCISLVWMILVCMEWVLL 389
T +FW SA+ IC +S+Q + E+ I +W ++ + V++
Sbjct: 765 TPPIFWRSAKTICRSGAVSQQDYISEVCYIGALWTFVIFIPSVVM 809
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 441 CIISIKLNTKPCTLNILQVYASTLRLLMKI 530
C I++ L T CT+N+L+ + ST+ LL +
Sbjct: 607 CTINL-LRTVTCTINLLRTFTSTINLLRTV 635
>SB_55478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +2
Query: 284 GETHMRRIGHFKTASGNTMYFSGLDDSSLHGVGFIMSAKMNQQVPWLQSSLRVHHKYQIK 463
GE H +GH K NT+ D +LH V + ++ + VP S H +
Sbjct: 8 GEVHTAVVGHQKIKHKNTLIH---DIRNLHLVFYFRTSNLQGHVPSAPHSFGEVHTAVVG 64
Query: 464 HQAL 475
HQ +
Sbjct: 65 HQKI 68
>SB_23379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 98 PGPAGVKLATEALTCRRNKTNSTKTSIRAHHPIGTWKR 211
PG V++A EAL C K + K+ H + + KR
Sbjct: 632 PGQTAVEVAEEALICAEQKDSEIKSPASLQHDVLSNKR 669
>SB_46161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.9 bits (59), Expect = 5.9
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Frame = +2
Query: 257 SHDISILGIGETHMRRIGHFKTASGNTMYFSG---LDDS----SLHGVGFIMSAKMNQQ- 412
S D +I I E +R + + + FSG L+D+ + G F M+ K +
Sbjct: 3 SEDTAIQLIAEAEKKRFQQLQWLNNLILNFSGSSKLEDAVELYTRAGNSFKMAKKWSAAG 62
Query: 413 VPWLQSSLRVHHKYQIKHQALHA*HPASICFHSASSDEDIENF 541
+L+++ Q KH+A + A CF A ++E ++ +
Sbjct: 63 TAFLEAAKIQRESLQSKHEAAQSYVDAGTCFKKADNEEAVKAY 105
>SB_5911| Best HMM Match : Exo_endo_phos (HMM E-Value=0.011)
Length = 304
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 429 PVSECIISIKLNTKPCTLNILQVYAST 509
P+S+ ++ + ++K C L I+Q YA T
Sbjct: 23 PISDRLLRTRFDSKHCKLTIIQCYAPT 49
>SB_20793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 257 SHDISILGIGETHMRRIGHFKTASGNTMYFS 349
+ DI I+GI ETH G + G T FS
Sbjct: 161 NRDIDIMGISETHWTGQGKMQLRDGETNDFS 191
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +2
Query: 263 DISILGIGETHMRRIGHFKTASGNTMYFSG---LDDSSLHGVGFIMSAKMNQQ-VPWLQS 430
++++LGI E+ G + SG + +SG D + + GV ++S + + W
Sbjct: 224 NLTVLGISESRWTGSGQKRLTSGELLLYSGHEQEDAAHIQGVALMLSKSAQRALIGWEAH 283
Query: 431 SLRV-HHKYQIKHQALHA*HPASICFHSASSDEDIENFYGTL 553
R+ + K + ++ + S +E+ +NFY L
Sbjct: 284 GPRIMTASFYTKKKRINMDIIQCYAPTNDSEEEEKDNFYNRL 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,596,662
Number of Sequences: 59808
Number of extensions: 406177
Number of successful extensions: 1035
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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