BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0975.Seq (565 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 178 5e-45 BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 178 5e-45 AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 178 5e-45 AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 178 5e-45 BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 30 2.5 AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 30 2.5 AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 30 2.5 AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 3.3 AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 3.3 AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 3.3 AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 7.6 >D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein S4 protein. Length = 261 Score = 178 bits (433), Expect = 5e-45 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = +2 Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433 +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151 Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565 PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+ Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195 Score = 155 bits (376), Expect = 4e-38 Identities = 71/87 (81%), Positives = 78/87 (89%) Frame = +3 Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182 HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV Q Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQ 67 Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263 RL+KV GKVRTDPTYPAG+MDV++L + Sbjct: 68 RLVKVYGKVRTDPTYPAGYMDVITLEK 94 >BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p protein. Length = 261 Score = 178 bits (433), Expect = 5e-45 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = +2 Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433 +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151 Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565 PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+ Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195 Score = 161 bits (390), Expect = 8e-40 Identities = 73/87 (83%), Positives = 80/87 (91%) Frame = +3 Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182 HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67 Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263 RL+KVDGKVRTDPTYPAG+MDV++L + Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94 >AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB, isoform B protein. Length = 261 Score = 178 bits (433), Expect = 5e-45 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = +2 Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433 +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151 Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565 PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+ Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195 Score = 161 bits (390), Expect = 8e-40 Identities = 73/87 (83%), Positives = 80/87 (91%) Frame = +3 Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182 HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67 Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263 RL+KVDGKVRTDPTYPAG+MDV++L + Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94 >AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA, isoform A protein. Length = 261 Score = 178 bits (433), Expect = 5e-45 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = +2 Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433 +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151 Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565 PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+ Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195 Score = 161 bits (390), Expect = 8e-40 Identities = 73/87 (83%), Positives = 80/87 (91%) Frame = +3 Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182 HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67 Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263 RL+KVDGKVRTDPTYPAG+MDV++L + Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94 >BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p protein. Length = 1098 Score = 29.9 bits (64), Expect = 2.5 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 17 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193 K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611 >AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p protein. Length = 561 Score = 29.9 bits (64), Expect = 2.5 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 17 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193 K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K Sbjct: 18 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74 >AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA protein. Length = 1098 Score = 29.9 bits (64), Expect = 2.5 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 17 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193 K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611 >AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B protein. Length = 2077 Score = 29.5 bits (63), Expect = 3.3 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -1 Query: 418 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251 G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L E Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945 >AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF, isoform F protein. Length = 2077 Score = 29.5 bits (63), Expect = 3.3 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -1 Query: 418 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251 G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L E Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945 >AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE, isoform E protein. Length = 2077 Score = 29.5 bits (63), Expect = 3.3 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -1 Query: 418 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251 G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L E Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945 >AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB, isoform B protein. Length = 737 Score = 28.3 bits (60), Expect = 7.6 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = +3 Query: 27 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 197 ++W L + AP P G + E +R ++ ++TG E++++VKQ KV Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62 Query: 198 -DGKVRTDPTYP 230 + KV PT P Sbjct: 63 EEEKVEIPPTEP 74 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,020,234 Number of Sequences: 53049 Number of extensions: 639078 Number of successful extensions: 1809 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1707 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1809 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2193288294 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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