SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0975.Seq
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   178   5e-45
BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   178   5e-45
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   178   5e-45
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   178   5e-45
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro...    30   2.5  
AY051840-1|AAK93264.1|  561|Drosophila melanogaster LD34444p pro...    30   2.5  
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA...    30   2.5  
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp...    29   3.3  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   3.3  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   3.3  
AE013599-1564|AAM68647.1|  737|Drosophila melanogaster CG8772-PB...    28   7.6  

>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  178 bits (433), Expect = 5e-45
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +2

Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
           +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPD
Sbjct: 92  LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151

Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
           PLI  NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195



 Score =  155 bits (376), Expect = 4e-38
 Identities = 71/87 (81%), Positives = 78/87 (89%)
 Frame = +3

Query: 3   HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
           HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV Q
Sbjct: 8   HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQ 67

Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
           RL+KV GKVRTDPTYPAG+MDV++L +
Sbjct: 68  RLVKVYGKVRTDPTYPAGYMDVITLEK 94


>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  178 bits (433), Expect = 5e-45
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +2

Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
           +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPD
Sbjct: 92  LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151

Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
           PLI  NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195



 Score =  161 bits (390), Expect = 8e-40
 Identities = 73/87 (83%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
           HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8   HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67

Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
           RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68  RLVKVDGKVRTDPTYPAGYMDVITLEK 94


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  178 bits (433), Expect = 5e-45
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +2

Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
           +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPD
Sbjct: 92  LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151

Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
           PLI  NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195



 Score =  161 bits (390), Expect = 8e-40
 Identities = 73/87 (83%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
           HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8   HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67

Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
           RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68  RLVKVDGKVRTDPTYPAGYMDVITLEK 94


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  178 bits (433), Expect = 5e-45
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = +2

Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
           +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPD
Sbjct: 92  LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151

Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
           PLI  NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195



 Score =  161 bits (390), Expect = 8e-40
 Identities = 73/87 (83%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
           HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8   HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67

Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
           RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68  RLVKVDGKVRTDPTYPAGYMDVITLEK 94


>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
           protein.
          Length = 1098

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 17  KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193
           K  QS+D  +    +     NR+ ++ + L+ G+  E+     FDRK SP   ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611


>AY051840-1|AAK93264.1|  561|Drosophila melanogaster LD34444p
           protein.
          Length = 561

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 17  KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193
           K  QS+D  +    +     NR+ ++ + L+ G+  E+     FDRK SP   ET P K
Sbjct: 18  KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74


>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
           protein.
          Length = 1098

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 17  KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193
           K  QS+D  +    +     NR+ ++ + L+ G+  E+     FDRK SP   ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611


>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
            protein.
          Length = 2077

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -1

Query: 418  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L  E
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
            isoform F protein.
          Length = 2077

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -1

Query: 418  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L  E
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
            isoform E protein.
          Length = 2077

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -1

Query: 418  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L  E
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945


>AE013599-1564|AAM68647.1|  737|Drosophila melanogaster CG8772-PB,
           isoform B protein.
          Length = 737

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = +3

Query: 27  KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 197
           ++W L +     AP P  G +   E       +R ++     ++TG E++++VKQ   KV
Sbjct: 4   RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62

Query: 198 -DGKVRTDPTYP 230
            + KV   PT P
Sbjct: 63  EEEKVEIPPTEP 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,020,234
Number of Sequences: 53049
Number of extensions: 639078
Number of successful extensions: 1809
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -