Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0975.Seq
(565 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 178 5e-45
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 178 5e-45
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 178 5e-45
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 178 5e-45
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 30 2.5
AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 30 2.5
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 30 2.5
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 3.3
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 3.3
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 3.3
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 7.6
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 178 bits (433), Expect = 5e-45
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
+EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD
Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195
Score = 155 bits (376), Expect = 4e-38
Identities = 71/87 (81%), Positives = 78/87 (89%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV Q
Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
RL+KV GKVRTDPTYPAG+MDV++L +
Sbjct: 68 RLVKVYGKVRTDPTYPAGYMDVITLEK 94
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 178 bits (433), Expect = 5e-45
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
+EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD
Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195
Score = 161 bits (390), Expect = 8e-40
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 178 bits (433), Expect = 5e-45
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
+EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD
Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195
Score = 161 bits (390), Expect = 8e-40
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 178 bits (433), Expect = 5e-45
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
+EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD
Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKF*SGNLCMITGGRNLGRVGTI 565
PLI NDS+Q+DIA+ KI D+IKF SGNLCMITGGRNLGRVGT+
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTV 195
Score = 161 bits (390), Expect = 8e-40
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94
>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 17 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p
protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 17 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 18 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74
>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 17 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 193
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -1
Query: 418 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L E
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -1
Query: 418 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L E
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -1
Query: 418 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLLNE 251
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L E
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKLEQE 945
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 27 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 197
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 198 -DGKVRTDPTYP 230
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,020,234
Number of Sequences: 53049
Number of extensions: 639078
Number of successful extensions: 1809
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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