Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0974.Seq
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 48 9e-07
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 31 0.11
SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c... 27 1.4
SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces p... 27 1.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.9
SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyc... 27 2.5
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 27 2.5
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 2.5
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 26 3.3
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 25 10.0
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 48.0 bits (109), Expect = 9e-07
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +1
Query: 31 EIILVTINFRLGPYGFLC----VDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTL 198
+ ILV+ RL +GFL ++ S N G DQ L L W ++I++FGG+ + +
Sbjct: 134 KFILVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAV 193
Query: 199 AGIGTGGENVLMHVLY 246
GI G + L ++Y
Sbjct: 194 GGISAGSYSALFQLIY 209
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 31.1 bits (67), Expect = 0.11
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +1
Query: 70 YGFLCVDT-----PEVSGNQGLKDQILALRWVKENIDAFGGDPGK-VTLAGIGTGGE--N 225
+G +CV PE D I + +WV NI+ G +P + L G GG +
Sbjct: 120 FGCVCVSVDYRLAPESKFPVAHNDAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVS 179
Query: 226 VLMHVLYGNKI 258
VL H+ KI
Sbjct: 180 VLSHIARDEKI 190
>SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 708
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -1
Query: 227 TFSPPVPMPASVTFPGSPPKASIFSLTQRKARI*SLSPWLPDTSGVSTHKNP 72
+F PV + S +P PP + SL +K + S T + T+ NP
Sbjct: 38 SFMDPVSLFCSSPYPNLPPHSRSSSLESKKPSVASQDVKSDGTLPIGTNNNP 89
>SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -1
Query: 383 FFYVVRNKTKILGQSEWYCRICFSHHQCWKCQSTVYYDLT 264
F++ +R + + + CR C +CW + YY L+
Sbjct: 368 FWHNLREPEGVPAEEVYKCRSCEFQKECWWLKKKQYYPLS 407
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 254 LLP*STCMRTFSPPVPMPASVTFPGSPP 171
L P RT +PPVP P S+ P +PP
Sbjct: 403 LPPLGNASRTSTPPVPTPPSLP-PSAPP 429
>SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 2.5
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = +3
Query: 153 RKYRCFWWRPWKSYAGWHRHRRRKCPHACTLWQQDLFSKVIIDSGLTLPTLVMAETDSTI 332
R+Y W W+ A + +K PHA W DL + I++ +L L++ D
Sbjct: 126 RRYAHEWRESWEK-ADYIMEAMKKYPHAEWFWWVDL-TTFIMEPQYSLEKLIINRLDHIA 183
Query: 333 PFRLAQDLGFIA--YH------VKEAINFLATQD 410
+ + F +H E INF+ QD
Sbjct: 184 TRNITDSMEFNPKNFHEIPFVDYSEDINFILGQD 217
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +3
Query: 375 VKEAINFLATQDSRRVIRSSYKYDFRYKPCIENNATGVNTFATKQCRK 518
+K AI F ++ R Y YD+ + C T ++ T C K
Sbjct: 357 IKHAIGFRSSVQQARSQFRGYCYDYLFMHCNNGEKTSLHLLRTLICMK 404
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 136 ALRWVKENIDAFGGDPGKVTLAGIGTGG 219
AL + EN D G +P K+ + G GG
Sbjct: 157 ALLYCYENADTLGINPNKIAVGGSSAGG 184
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 399 ATQDSRRVIRSSYKYDFRYKPCIENNATGVNTFATKQCRK 518
A + R +I S KY YK C TG+ F C K
Sbjct: 614 AKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 24.6 bits (51), Expect = 10.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 177 RPWKSYAGWHRHRRRKCPHACT 242
R W Y G H R + P CT
Sbjct: 248 REWSLYQGIHEETRMEHPDVCT 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,418,178
Number of Sequences: 5004
Number of extensions: 50208
Number of successful extensions: 141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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