BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0974.Seq (557 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 48 9e-07 SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 31 0.11 SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c... 27 1.4 SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces p... 27 1.9 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.9 SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyc... 27 2.5 SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 27 2.5 SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 2.5 SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 26 3.3 SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 25 10.0 >SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces pombe|chr 3|||Manual Length = 520 Score = 48.0 bits (109), Expect = 9e-07 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = +1 Query: 31 EIILVTINFRLGPYGFLC----VDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTL 198 + ILV+ RL +GFL ++ S N G DQ L L W ++I++FGG+ + + Sbjct: 134 KFILVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAV 193 Query: 199 AGIGTGGENVLMHVLY 246 GI G + L ++Y Sbjct: 194 GGISAGSYSALFQLIY 209 >SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 339 Score = 31.1 bits (67), Expect = 0.11 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = +1 Query: 70 YGFLCVDT-----PEVSGNQGLKDQILALRWVKENIDAFGGDPGK-VTLAGIGTGGE--N 225 +G +CV PE D I + +WV NI+ G +P + L G GG + Sbjct: 120 FGCVCVSVDYRLAPESKFPVAHNDAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVS 179 Query: 226 VLMHVLYGNKI 258 VL H+ KI Sbjct: 180 VLSHIARDEKI 190 >SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 708 Score = 27.5 bits (58), Expect = 1.4 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = -1 Query: 227 TFSPPVPMPASVTFPGSPPKASIFSLTQRKARI*SLSPWLPDTSGVSTHKNP 72 +F PV + S +P PP + SL +K + S T + T+ NP Sbjct: 38 SFMDPVSLFCSSPYPNLPPHSRSSSLESKKPSVASQDVKSDGTLPIGTNNNP 89 >SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 409 Score = 27.1 bits (57), Expect = 1.9 Identities = 10/40 (25%), Positives = 19/40 (47%) Frame = -1 Query: 383 FFYVVRNKTKILGQSEWYCRICFSHHQCWKCQSTVYYDLT 264 F++ +R + + + CR C +CW + YY L+ Sbjct: 368 FWHNLREPEGVPAEEVYKCRSCEFQKECWWLKKKQYYPLS 407 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 27.1 bits (57), Expect = 1.9 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -1 Query: 254 LLP*STCMRTFSPPVPMPASVTFPGSPP 171 L P RT +PPVP P S+ P +PP Sbjct: 403 LPPLGNASRTSTPPVPTPPSLP-PSAPP 429 >SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 347 Score = 26.6 bits (56), Expect = 2.5 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Frame = +3 Query: 153 RKYRCFWWRPWKSYAGWHRHRRRKCPHACTLWQQDLFSKVIIDSGLTLPTLVMAETDSTI 332 R+Y W W+ A + +K PHA W DL + I++ +L L++ D Sbjct: 126 RRYAHEWRESWEK-ADYIMEAMKKYPHAEWFWWVDL-TTFIMEPQYSLEKLIINRLDHIA 183 Query: 333 PFRLAQDLGFIA--YH------VKEAINFLATQD 410 + + F +H E INF+ QD Sbjct: 184 TRNITDSMEFNPKNFHEIPFVDYSEDINFILGQD 217 >SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|Schizosaccharomyces pombe|chr 3|||Manual Length = 636 Score = 26.6 bits (56), Expect = 2.5 Identities = 13/48 (27%), Positives = 20/48 (41%) Frame = +3 Query: 375 VKEAINFLATQDSRRVIRSSYKYDFRYKPCIENNATGVNTFATKQCRK 518 +K AI F ++ R Y YD+ + C T ++ T C K Sbjct: 357 IKHAIGFRSSVQQARSQFRGYCYDYLFMHCNNGEKTSLHLLRTLICMK 404 >SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 341 Score = 26.6 bits (56), Expect = 2.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 136 ALRWVKENIDAFGGDPGKVTLAGIGTGG 219 AL + EN D G +P K+ + G GG Sbjct: 157 ALLYCYENADTLGINPNKIAVGGSSAGG 184 >SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 937 Score = 26.2 bits (55), Expect = 3.3 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = +3 Query: 399 ATQDSRRVIRSSYKYDFRYKPCIENNATGVNTFATKQCRK 518 A + R +I S KY YK C TG+ F C K Sbjct: 614 AKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653 >SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 369 Score = 24.6 bits (51), Expect = 10.0 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +3 Query: 177 RPWKSYAGWHRHRRRKCPHACT 242 R W Y G H R + P CT Sbjct: 248 REWSLYQGIHEETRMEHPDVCT 269 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,418,178 Number of Sequences: 5004 Number of extensions: 50208 Number of successful extensions: 141 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 141 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 233995432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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