SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0974.Seq
         (557 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)              91   6e-19
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)               85   4e-17
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)              85   5e-17
SB_56819| Best HMM Match : COesterase (HMM E-Value=0)                  81   6e-16
SB_38136| Best HMM Match : COesterase (HMM E-Value=0)                  79   2e-15
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)             79   3e-15
SB_23484| Best HMM Match : COesterase (HMM E-Value=0)                  78   6e-15
SB_56597| Best HMM Match : COesterase (HMM E-Value=0)                  77   7e-15
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)              75   3e-14
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   6e-11
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)            63   2e-10
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   2e-10
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   1e-07
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   1e-06
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)                50   1e-06
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)              47   9e-06
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)               44   1e-04
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)               40   0.001
SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.28 
SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_57043| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.4  
SB_118| Best HMM Match : GIY-YIG (HMM E-Value=3.2)                     28   4.5  
SB_24351| Best HMM Match : GIY-YIG (HMM E-Value=3.2)                   28   4.5  
SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)           28   5.9  
SB_44729| Best HMM Match : SET (HMM E-Value=0)                         27   7.9  

>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 621

 Score = 91.1 bits (216), Expect = 6e-19
 Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +1

Query: 31  EIILVTINFRLGPYGFLCVDTPE-VSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGI 207
           E+++V+I +RLGP+GFL  +  E V GNQGL DQ+ AL+WVKENI+ F GDP +VT+ G 
Sbjct: 183 EVVVVSIQYRLGPFGFLTSEKGESVQGNQGLLDQVQALKWVKENIENFNGDPSQVTIFGH 242

Query: 208 GTGGENVLMHVL 243
           G GG +V +H++
Sbjct: 243 GAGGSSVALHII 254


>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 780

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 39/73 (53%), Positives = 50/73 (68%)
 Frame = +1

Query: 25  KHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAG 204
           ++ I+LVTI++RLG  GFL     E  GN G+ DQI ALRWVKENI  FGGDP ++TL G
Sbjct: 236 QYGIVLVTIHYRLGVLGFLTTGDVEAPGNAGMLDQIQALRWVKENIAGFGGDPNQITLVG 295

Query: 205 IGTGGENVLMHVL 243
              G  +V +H+L
Sbjct: 296 NSAGASSVGLHLL 308


>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 741

 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = +1

Query: 4   YGPKYLMK-HEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGD 180
           Y P  L+  +++I+VTIN+RLG  GF  +   E  GN GL DQ+LAL+WV++NI +FGG+
Sbjct: 195 YDPSVLVALNDVIVVTINYRLGVLGFFNIPDTEYKGNYGLLDQVLALQWVQQNIASFGGN 254

Query: 181 PGKVTLAGIGTGGENVLMHVL 243
           P  VT+ G   GG +V +H+L
Sbjct: 255 PKSVTIFGESAGGMSVSLHLL 275


>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 613

 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 37/72 (51%), Positives = 53/72 (73%)
 Frame = +1

Query: 28  HEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGI 207
           +++I+VT+N+RLG  GFL V   +V+GN  + DQILAL+WV+++I  FGGDP +VTL G 
Sbjct: 218 NDVIVVTMNYRLGLLGFLHVAGTDVTGNYAMYDQILALKWVQQHIGCFGGDPSQVTLFGQ 277

Query: 208 GTGGENVLMHVL 243
             GG +VL+  L
Sbjct: 278 SAGGASVLLLTL 289


>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 590

 Score = 79.0 bits (186), Expect = 2e-15
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +1

Query: 34  IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGIGT 213
           ++LVTI +RLGP+GF+        GN G+ DQI AL+WV+ENI AF GDP +VT+ G   
Sbjct: 161 VVLVTIQYRLGPFGFMSTGDSVAPGNYGMLDQIAALKWVQENIAAFHGDPSRVTIFGESA 220

Query: 214 GGENV 228
           GG +V
Sbjct: 221 GGSSV 225


>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
          Length = 762

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +1

Query: 4   YGPKYLMKH-EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGD 180
           Y    L  H +II+VT+N RL  +GFL +   +++GN G  DQ+ AL+WV +NI  FGGD
Sbjct: 541 YHSSVLSSHNDIIVVTLNHRLALFGFLYISGTDLAGNYGYLDQVQALKWVHQNIGNFGGD 600

Query: 181 PGKVTLAGIGTGGENVLMHVL 243
           P  VT+ G   GG +V  H++
Sbjct: 601 PNSVTIFGESAGGASVHFHIM 621


>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 586

 Score = 77.8 bits (183), Expect = 6e-15
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +1

Query: 13  KYLMKHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKV 192
           ++L    I+LVT+ +RLG +GFL     E  GN GL DQ+ AL+W K NI  FGG+P  +
Sbjct: 158 EFLPLRGIVLVTVQYRLGIFGFLTTGDAEAPGNAGLLDQVEALQWTKRNIFNFGGEPNNI 217

Query: 193 TLAGIGTGGENVLMHVL 243
           T+ G   GG +V +H++
Sbjct: 218 TIMGESAGGASVGLHLM 234


>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 505

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 33/72 (45%), Positives = 51/72 (70%)
 Frame = +1

Query: 28  HEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGI 207
           + +I+VTIN+RL   GFL +   ++ GN G+ DQ+ AL+WV++NI +FGG+P  VTL G 
Sbjct: 89  NNVIVVTINYRLALLGFLHIPGTQLRGNYGMLDQVQALKWVQQNIASFGGNPSHVTLFGE 148

Query: 208 GTGGENVLMHVL 243
            +G  +V +H+L
Sbjct: 149 SSGAASVTLHIL 160


>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 682

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 35/70 (50%), Positives = 50/70 (71%)
 Frame = +1

Query: 34  IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGIGT 213
           I++VTIN+RLG  GFLC  + ++  N GL DQI AL+WV+ NI+ FGGD  +VT+ G+  
Sbjct: 147 IMVVTINYRLGILGFLC--SGDIKENLGLLDQIYALKWVQNNIERFGGDRSQVTIGGLSA 204

Query: 214 GGENVLMHVL 243
           GGE+  + +L
Sbjct: 205 GGESASILML 214


>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 353

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = +1

Query: 31  EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGIG 210
           E+I+VT+N RLG  G+L        GN G+ DQI+AL+W++ NI+ FGGDP  VTL G  
Sbjct: 155 EVIVVTLNNRLGVLGYLKYGDV-FRGNYGVADQIMALKWIRANIERFGGDPRHVTLLGQS 213

Query: 211 TG 216
            G
Sbjct: 214 AG 215


>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
          Length = 635

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 31/89 (34%), Positives = 46/89 (51%)
 Frame = +1

Query: 1   VYGPKYLMKHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGD 180
           V G       ++++VT N+RLG +GFL      +S N G++D    L+WV  NI  FGG 
Sbjct: 373 VDGSVLASNQKVVVVTFNYRLGAFGFLGNSKINISQNLGVEDAKAVLKWVNRNIKGFGGS 432

Query: 181 PGKVTLAGIGTGGENVLMHVLYGNKIYSV 267
            G VT+AG    G  +   +L    + S+
Sbjct: 433 AGMVTIAGNSIAGATITSLLLADPDVQSL 461


>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1659

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
 Frame = +1

Query: 10   PKYLMKHEIILVTINFRLGPYGFLCVDT------PEVSGNQGLKDQILALRWVKENIDAF 171
            P+++    ++ ++ N+RL  +GFL +D          SGN G  DQI+AL W+  NI  F
Sbjct: 1149 PEFVSNLGVVGISFNYRLNAFGFLSLDALSDGSKSNTSGNYGFMDQIMALSWIHTNIARF 1208

Query: 172  GGDPGKVTLAGIGTGGENVL 231
            GGDP +V L G  +G  + L
Sbjct: 1209 GGDPDRVILLGQSSGATSSL 1228


>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 533

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 24/49 (48%), Positives = 34/49 (69%)
 Frame = +1

Query: 31  EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGG 177
           EI++V+IN+RLG  GFL      ++GN G+ D I ALRWV+ NI+ + G
Sbjct: 162 EIVVVSINYRLGALGFLSTGEDGLNGNFGMLDVIEALRWVQNNIERYYG 210


>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 19/44 (43%), Positives = 32/44 (72%)
 Frame = +1

Query: 31  EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENI 162
           ++I+V +N+R+G +GFL      ++GN G+ DQ+ +L+WVK NI
Sbjct: 99  DVIVVVVNYRVGIFGFLATGKNGLTGNYGMLDQVKSLQWVKSNI 142


>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
          Length = 195

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 19/45 (42%), Positives = 33/45 (73%)
 Frame = +1

Query: 31  EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENID 165
           ++I+V +N+R+G +GFL      V+GN G+ DQ+ +L+WV+ NI+
Sbjct: 150 DVIVVVVNYRVGIFGFLATGKNGVTGNYGMLDQVKSLQWVRGNIN 194


>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
          Length = 424

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +1

Query: 19  LMKHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILAL 141
           L  H++I+VTIN+RLG  GF  +   +V GN GL DQ LAL
Sbjct: 138 LALHDVIVVTINYRLGVLGFFNIPDTDVKGNYGLFDQSLAL 178


>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 985

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/45 (44%), Positives = 32/45 (71%)
 Frame = +1

Query: 34  IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDA 168
           +I+V I +RLG +G+L        GN G+ DQI+AL+WV++NI++
Sbjct: 145 VIVVVIQYRLGVFGYLYNGK---KGNFGMLDQIMALKWVQKNIES 186



 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 160 IDAFGGDPGKVTLAGIGTGGENVLMHVL 243
           I+ FGG+P +VT+ G   GG +V + +L
Sbjct: 244 IETFGGNPQQVTIYGESAGGASVALLML 271


>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 604

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +1

Query: 34  IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENI 162
           +I+V   +RLG +G+L        GN G+ DQI+AL+WV+ NI
Sbjct: 144 VIVVIAQYRLGMFGYLYNGN---KGNFGMLDQIMALKWVQNNI 183


>SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 169 FGGDPGKVTLAGIGTGGENV 228
           FGGDPGKVT+ G   GG +V
Sbjct: 15  FGGDPGKVTIFGESAGGASV 34


>SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 359

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 169 FGGDPGKVTLAGIGTGGENV 228
           FGGD GKVT+ G   GG +V
Sbjct: 16  FGGDAGKVTIFGESAGGASV 35


>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3038

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 347 GQSEWYCRICFSHHQCWKC 291
           G + W C IC   H  WKC
Sbjct: 463 GNASWKCVICSGPHGLWKC 481


>SB_57043| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 135

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 380 FYVVRNKTKILGQSEWYCRICFSHH 306
           F+  RNK K++  + W C++C + H
Sbjct: 64  FFEWRNKYKVVASAPWACQLCAALH 88


>SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1093

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 368 RNKTKILGQSEWYCRIC 318
           R+KTK +   EWYC +C
Sbjct: 930 RSKTKYMLNKEWYCAVC 946


>SB_118| Best HMM Match : GIY-YIG (HMM E-Value=3.2)
          Length = 91

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 426 RSSYKYDFRYKPCIENNATGVNTFATKQC 512
           +SS +  FRY+  I NNA  + TF  K C
Sbjct: 15  KSSKRLPFRYRYQIANNAFRICTFRDKSC 43


>SB_24351| Best HMM Match : GIY-YIG (HMM E-Value=3.2)
          Length = 91

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 426 RSSYKYDFRYKPCIENNATGVNTFATKQC 512
           +SS +  FRY+  I NNA  + TF  K C
Sbjct: 15  KSSKRLPFRYRYQIANNAFRICTFRDKSC 43


>SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)
          Length = 360

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 100 VSGNQGLKDQILALRWVKENIDAFGGDPG 186
           VSGN G+KD+ + L  +K  +D FGG+ G
Sbjct: 56  VSGNLGIKDEAVTLSNLK--MDIFGGNIG 82


>SB_44729| Best HMM Match : SET (HMM E-Value=0)
          Length = 1112

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = -1

Query: 218 PPVPMPASVTFPGSPPKASIFSLTQRKARI*SLSPWLPDTSGVSTHKNP*GPRRKLIVTK 39
           P  P   + +FPGSP    +   T  K +I  + P L    G   H      +   I+ K
Sbjct: 165 PQTPPRLNGSFPGSPVNGEVSPNTALKLKIRKVRPSLDGKEGNKNHHRLSKEKETFIIVK 224


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,981,320
Number of Sequences: 59808
Number of extensions: 381906
Number of successful extensions: 1036
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -