Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0974.Seq
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 81 6e-16
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 79 2e-15
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 79 3e-15
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 78 6e-15
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 77 7e-15
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 63 2e-10
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 50 1e-06
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 47 9e-06
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_57043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_118| Best HMM Match : GIY-YIG (HMM E-Value=3.2) 28 4.5
SB_24351| Best HMM Match : GIY-YIG (HMM E-Value=3.2) 28 4.5
SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6) 28 5.9
SB_44729| Best HMM Match : SET (HMM E-Value=0) 27 7.9
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +1
Query: 31 EIILVTINFRLGPYGFLCVDTPE-VSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGI 207
E+++V+I +RLGP+GFL + E V GNQGL DQ+ AL+WVKENI+ F GDP +VT+ G
Sbjct: 183 EVVVVSIQYRLGPFGFLTSEKGESVQGNQGLLDQVQALKWVKENIENFNGDPSQVTIFGH 242
Query: 208 GTGGENVLMHVL 243
G GG +V +H++
Sbjct: 243 GAGGSSVALHII 254
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/73 (53%), Positives = 50/73 (68%)
Frame = +1
Query: 25 KHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAG 204
++ I+LVTI++RLG GFL E GN G+ DQI ALRWVKENI FGGDP ++TL G
Sbjct: 236 QYGIVLVTIHYRLGVLGFLTTGDVEAPGNAGMLDQIQALRWVKENIAGFGGDPNQITLVG 295
Query: 205 IGTGGENVLMHVL 243
G +V +H+L
Sbjct: 296 NSAGASSVGLHLL 308
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 YGPKYLMK-HEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGD 180
Y P L+ +++I+VTIN+RLG GF + E GN GL DQ+LAL+WV++NI +FGG+
Sbjct: 195 YDPSVLVALNDVIVVTINYRLGVLGFFNIPDTEYKGNYGLLDQVLALQWVQQNIASFGGN 254
Query: 181 PGKVTLAGIGTGGENVLMHVL 243
P VT+ G GG +V +H+L
Sbjct: 255 PKSVTIFGESAGGMSVSLHLL 275
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +1
Query: 28 HEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGI 207
+++I+VT+N+RLG GFL V +V+GN + DQILAL+WV+++I FGGDP +VTL G
Sbjct: 218 NDVIVVTMNYRLGLLGFLHVAGTDVTGNYAMYDQILALKWVQQHIGCFGGDPSQVTLFGQ 277
Query: 208 GTGGENVLMHVL 243
GG +VL+ L
Sbjct: 278 SAGGASVLLLTL 289
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +1
Query: 34 IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGIGT 213
++LVTI +RLGP+GF+ GN G+ DQI AL+WV+ENI AF GDP +VT+ G
Sbjct: 161 VVLVTIQYRLGPFGFMSTGDSVAPGNYGMLDQIAALKWVQENIAAFHGDPSRVTIFGESA 220
Query: 214 GGENV 228
GG +V
Sbjct: 221 GGSSV 225
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 YGPKYLMKH-EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGD 180
Y L H +II+VT+N RL +GFL + +++GN G DQ+ AL+WV +NI FGGD
Sbjct: 541 YHSSVLSSHNDIIVVTLNHRLALFGFLYISGTDLAGNYGYLDQVQALKWVHQNIGNFGGD 600
Query: 181 PGKVTLAGIGTGGENVLMHVL 243
P VT+ G GG +V H++
Sbjct: 601 PNSVTIFGESAGGASVHFHIM 621
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 77.8 bits (183), Expect = 6e-15
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 13 KYLMKHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKV 192
++L I+LVT+ +RLG +GFL E GN GL DQ+ AL+W K NI FGG+P +
Sbjct: 158 EFLPLRGIVLVTVQYRLGIFGFLTTGDAEAPGNAGLLDQVEALQWTKRNIFNFGGEPNNI 217
Query: 193 TLAGIGTGGENVLMHVL 243
T+ G GG +V +H++
Sbjct: 218 TIMGESAGGASVGLHLM 234
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 77.4 bits (182), Expect = 7e-15
Identities = 33/72 (45%), Positives = 51/72 (70%)
Frame = +1
Query: 28 HEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGI 207
+ +I+VTIN+RL GFL + ++ GN G+ DQ+ AL+WV++NI +FGG+P VTL G
Sbjct: 89 NNVIVVTINYRLALLGFLHIPGTQLRGNYGMLDQVQALKWVQQNIASFGGNPSHVTLFGE 148
Query: 208 GTGGENVLMHVL 243
+G +V +H+L
Sbjct: 149 SSGAASVTLHIL 160
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +1
Query: 34 IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGIGT 213
I++VTIN+RLG GFLC + ++ N GL DQI AL+WV+ NI+ FGGD +VT+ G+
Sbjct: 147 IMVVTINYRLGILGFLC--SGDIKENLGLLDQIYALKWVQNNIERFGGDRSQVTIGGLSA 204
Query: 214 GGENVLMHVL 243
GGE+ + +L
Sbjct: 205 GGESASILML 214
>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 31 EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGDPGKVTLAGIG 210
E+I+VT+N RLG G+L GN G+ DQI+AL+W++ NI+ FGGDP VTL G
Sbjct: 155 EVIVVTLNNRLGVLGYLKYGDV-FRGNYGVADQIMALKWIRANIERFGGDPRHVTLLGQS 213
Query: 211 TG 216
G
Sbjct: 214 AG 215
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/89 (34%), Positives = 46/89 (51%)
Frame = +1
Query: 1 VYGPKYLMKHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGGD 180
V G ++++VT N+RLG +GFL +S N G++D L+WV NI FGG
Sbjct: 373 VDGSVLASNQKVVVVTFNYRLGAFGFLGNSKINISQNLGVEDAKAVLKWVNRNIKGFGGS 432
Query: 181 PGKVTLAGIGTGGENVLMHVLYGNKIYSV 267
G VT+AG G + +L + S+
Sbjct: 433 AGMVTIAGNSIAGATITSLLLADPDVQSL 461
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 10 PKYLMKHEIILVTINFRLGPYGFLCVDT------PEVSGNQGLKDQILALRWVKENIDAF 171
P+++ ++ ++ N+RL +GFL +D SGN G DQI+AL W+ NI F
Sbjct: 1149 PEFVSNLGVVGISFNYRLNAFGFLSLDALSDGSKSNTSGNYGFMDQIMALSWIHTNIARF 1208
Query: 172 GGDPGKVTLAGIGTGGENVL 231
GGDP +V L G +G + L
Sbjct: 1209 GGDPDRVILLGQSSGATSSL 1228
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 31 EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDAFGG 177
EI++V+IN+RLG GFL ++GN G+ D I ALRWV+ NI+ + G
Sbjct: 162 EIVVVSINYRLGALGFLSTGEDGLNGNFGMLDVIEALRWVQNNIERYYG 210
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = +1
Query: 31 EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENI 162
++I+V +N+R+G +GFL ++GN G+ DQ+ +L+WVK NI
Sbjct: 99 DVIVVVVNYRVGIFGFLATGKNGLTGNYGMLDQVKSLQWVKSNI 142
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +1
Query: 31 EIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENID 165
++I+V +N+R+G +GFL V+GN G+ DQ+ +L+WV+ NI+
Sbjct: 150 DVIVVVVNYRVGIFGFLATGKNGVTGNYGMLDQVKSLQWVRGNIN 194
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 19 LMKHEIILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILAL 141
L H++I+VTIN+RLG GF + +V GN GL DQ LAL
Sbjct: 138 LALHDVIVVTINYRLGVLGFFNIPDTDVKGNYGLFDQSLAL 178
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +1
Query: 34 IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENIDA 168
+I+V I +RLG +G+L GN G+ DQI+AL+WV++NI++
Sbjct: 145 VIVVVIQYRLGVFGYLYNGK---KGNFGMLDQIMALKWVQKNIES 186
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 160 IDAFGGDPGKVTLAGIGTGGENVLMHVL 243
I+ FGG+P +VT+ G GG +V + +L
Sbjct: 244 IETFGGNPQQVTIYGESAGGASVALLML 271
>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 34 IILVTINFRLGPYGFLCVDTPEVSGNQGLKDQILALRWVKENI 162
+I+V +RLG +G+L GN G+ DQI+AL+WV+ NI
Sbjct: 144 VIVVIAQYRLGMFGYLYNGN---KGNFGMLDQIMALKWVQNNI 183
>SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 169 FGGDPGKVTLAGIGTGGENV 228
FGGDPGKVT+ G GG +V
Sbjct: 15 FGGDPGKVTIFGESAGGASV 34
>SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 169 FGGDPGKVTLAGIGTGGENV 228
FGGD GKVT+ G GG +V
Sbjct: 16 FGGDAGKVTIFGESAGGASV 35
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 347 GQSEWYCRICFSHHQCWKC 291
G + W C IC H WKC
Sbjct: 463 GNASWKCVICSGPHGLWKC 481
>SB_57043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 380 FYVVRNKTKILGQSEWYCRICFSHH 306
F+ RNK K++ + W C++C + H
Sbjct: 64 FFEWRNKYKVVASAPWACQLCAALH 88
>SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1093
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 368 RNKTKILGQSEWYCRIC 318
R+KTK + EWYC +C
Sbjct: 930 RSKTKYMLNKEWYCAVC 946
>SB_118| Best HMM Match : GIY-YIG (HMM E-Value=3.2)
Length = 91
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 426 RSSYKYDFRYKPCIENNATGVNTFATKQC 512
+SS + FRY+ I NNA + TF K C
Sbjct: 15 KSSKRLPFRYRYQIANNAFRICTFRDKSC 43
>SB_24351| Best HMM Match : GIY-YIG (HMM E-Value=3.2)
Length = 91
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 426 RSSYKYDFRYKPCIENNATGVNTFATKQC 512
+SS + FRY+ I NNA + TF K C
Sbjct: 15 KSSKRLPFRYRYQIANNAFRICTFRDKSC 43
>SB_29917| Best HMM Match : Chlorovi_GP_rpt (HMM E-Value=2.6)
Length = 360
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 100 VSGNQGLKDQILALRWVKENIDAFGGDPG 186
VSGN G+KD+ + L +K +D FGG+ G
Sbjct: 56 VSGNLGIKDEAVTLSNLK--MDIFGGNIG 82
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = -1
Query: 218 PPVPMPASVTFPGSPPKASIFSLTQRKARI*SLSPWLPDTSGVSTHKNP*GPRRKLIVTK 39
P P + +FPGSP + T K +I + P L G H + I+ K
Sbjct: 165 PQTPPRLNGSFPGSPVNGEVSPNTALKLKIRKVRPSLDGKEGNKNHHRLSKEKETFIIVK 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,981,320
Number of Sequences: 59808
Number of extensions: 381906
Number of successful extensions: 1036
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -