Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0973.Seq
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   3.3  
AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    23   3.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   4.3  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   4.3  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    22   7.6  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    22   7.6  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    22   7.6  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 173 KYGFRTSQLAPVAVSNTVSTTN 108
           K G R SQL  V + N + TTN
Sbjct: 52  KMGLRLSQLIDVNLKNQIMTTN 73


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 203 ANLGLPDVSYFPGRPVFWLSL 265
           A LGL D  Y  G+ V WL+L
Sbjct: 160 AALGLSDTFYLIGQFVAWLNL 180


>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = -1

Query: 188 RPVVGKYGFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDEEEN 36
           RPV    G  +    P+ V   VS     +   + +  F P     D+EE+
Sbjct: 41  RPVTFPNGEASPTRVPLGVDGVVSGDGSSVHDRSRSERFGPPYDGDDDEED 91


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 228 ETSGSPKFACXRSTARRRQI 169
           E    P  +C RS ARRR+I
Sbjct: 3   ELKRKPTSSCSRSPARRRRI 22


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 167 GFRTSQLAPVAVSNTVSTTN 108
           G + SQL  V++ N V TTN
Sbjct: 60  GLKLSQLIEVSLRNQVMTTN 79


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 3   KSKTMKTSIVLIFLLVACCT 62
           K KT++ +I+++ + V C T
Sbjct: 263 KRKTLRMTIMIVIVFVVCWT 282


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 3   KSKTMKTSIVLIFLLVACCT 62
           K KT++ +I+++ + V C T
Sbjct: 263 KRKTLRMTIMIVIVFVVCWT 282


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 407 FFIVTFFIYLLFDISPRSKLVLTYL 333
           F ++TFFIY  + +S  ++ ++  L
Sbjct: 570 FVVLTFFIYYYYAVSTANRHMVQVL 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,128
Number of Sequences: 2352
Number of extensions: 8915
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)