BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0972.Seq (399 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 24 0.48 EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.5 EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.5 EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.5 DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 2.6 X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 3.4 U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 3.4 U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 3.4 DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 21 4.5 DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 21 4.5 DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 4.5 AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 4.5 U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 5.9 EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 5.9 DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 21 5.9 DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 5.9 >AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein protein. Length = 392 Score = 24.2 bits (50), Expect = 0.48 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +2 Query: 221 DVSYFPGRPVFWLSLKC 271 D SY P P F L L+C Sbjct: 2 DASYVPNNPQFGLQLEC 18 >EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 311 Score = 22.6 bits (46), Expect = 1.5 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -2 Query: 200 ATAARPVVGKYGFRTSQLAPVAVSNTVSTTN 108 A + P+ K+G Q+ V N + TTN Sbjct: 23 ANESEPLEVKFGLTLQQIIDVDEKNQILTTN 53 >EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 311 Score = 22.6 bits (46), Expect = 1.5 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -2 Query: 200 ATAARPVVGKYGFRTSQLAPVAVSNTVSTTN 108 A + P+ K+G Q+ V N + TTN Sbjct: 23 ANESEPLEVKFGLTLQQIIDVDEKNQILTTN 53 >EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 311 Score = 22.6 bits (46), Expect = 1.5 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -2 Query: 200 ATAARPVVGKYGFRTSQLAPVAVSNTVSTTN 108 A + P+ K+G Q+ V N + TTN Sbjct: 23 ANESEPLEVKFGLTLQQIIDVDEKNQILTTN 53 >DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired protein. Length = 311 Score = 21.8 bits (44), Expect = 2.6 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -3 Query: 142 LLP*VTPLVPQTG 104 +LP TPLVPQ G Sbjct: 235 MLPKPTPLVPQQG 247 >X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium castaneum mRNAfor alhpa amylase 3'region. ). Length = 489 Score = 21.4 bits (43), Expect = 3.4 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = -2 Query: 167 GFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDE 45 GF Q++P + V+++NRP + ++ + +GDE Sbjct: 52 GFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDE 92 >U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II protein. Length = 490 Score = 21.4 bits (43), Expect = 3.4 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = -2 Query: 167 GFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDE 45 GF Q++P + V+++NRP + ++ + +GDE Sbjct: 53 GFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDE 93 >U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I protein. Length = 490 Score = 21.4 bits (43), Expect = 3.4 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = -2 Query: 167 GFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDE 45 GF Q++P + V+++NRP + ++ + +GDE Sbjct: 53 GFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDE 93 >DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory protein 11 protein. Length = 127 Score = 21.0 bits (42), Expect = 4.5 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +3 Query: 15 MKTSIVLIFLLVACCTLGAESTCICTTEY 101 MKT + L+F ++A + AE++ TT+Y Sbjct: 1 MKTLVPLLFFVIAIASSLAENSKY-TTKY 28 >DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 protein. Length = 377 Score = 21.0 bits (42), Expect = 4.5 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = -2 Query: 110 NRPIFGGANTGTFSPQSAAGD 48 N P++GG N + Q+ D Sbjct: 215 NSPLYGGVNESDWQQQNRNAD 235 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 21.0 bits (42), Expect = 4.5 Identities = 9/32 (28%), Positives = 14/32 (43%) Frame = -1 Query: 351 VSFNIFIKTKTIVIEQFEYGTESVPPRHFKLS 256 V + + K + E E+G E H K+S Sbjct: 1033 VGYRLANSDKPYLFETVEFGREEGKEHHLKIS 1064 >AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical protein protein. Length = 205 Score = 21.0 bits (42), Expect = 4.5 Identities = 7/16 (43%), Positives = 12/16 (75%), Gaps = 1/16 (6%) Frame = -1 Query: 117 YHKQAYIRWCK-YRYF 73 YHK+ Y ++C+ +YF Sbjct: 29 YHKEKYRKFCRILKYF 44 >U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. Length = 470 Score = 20.6 bits (41), Expect = 5.9 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -3 Query: 310 RTVRIRNRV 284 RTVR+RNRV Sbjct: 10 RTVRLRNRV 18 >EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hormone receptor protein. Length = 378 Score = 20.6 bits (41), Expect = 5.9 Identities = 6/20 (30%), Positives = 13/20 (65%) Frame = +3 Query: 3 KSKTMKTSIVLIFLLVACCT 62 K +T+K +I+++ + C T Sbjct: 270 KVRTLKMTIIIVLVFFVCWT 289 >DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc growth factor 2 protein. Length = 439 Score = 20.6 bits (41), Expect = 5.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 Query: 311 ITIVLVFINMLKLTCSSEKYQII 379 I IV + ++ K TC +KY I+ Sbjct: 410 IAIVDLSLDDFKGTCGRDKYDIL 432 >DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hormone receptor protein. Length = 378 Score = 20.6 bits (41), Expect = 5.9 Identities = 6/20 (30%), Positives = 13/20 (65%) Frame = +3 Query: 3 KSKTMKTSIVLIFLLVACCT 62 K +T+K +I+++ + C T Sbjct: 270 KVRTLKMTIIIVLVFFVCWT 289 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 103,818 Number of Sequences: 336 Number of extensions: 2469 Number of successful extensions: 19 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 122,585 effective HSP length: 51 effective length of database: 105,449 effective search space used: 8541369 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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