Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0972.Seq
(399 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 24 0.48
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.5
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 2.6
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 3.4
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 3.4
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 3.4
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 21 4.5
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 21 4.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 4.5
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 4.5
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 5.9
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 5.9
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 21 5.9
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 5.9
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 24.2 bits (50), Expect = 0.48
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 221 DVSYFPGRPVFWLSLKC 271
D SY P P F L L+C
Sbjct: 2 DASYVPNNPQFGLQLEC 18
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 200 ATAARPVVGKYGFRTSQLAPVAVSNTVSTTN 108
A + P+ K+G Q+ V N + TTN
Sbjct: 23 ANESEPLEVKFGLTLQQIIDVDEKNQILTTN 53
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 200 ATAARPVVGKYGFRTSQLAPVAVSNTVSTTN 108
A + P+ K+G Q+ V N + TTN
Sbjct: 23 ANESEPLEVKFGLTLQQIIDVDEKNQILTTN 53
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 200 ATAARPVVGKYGFRTSQLAPVAVSNTVSTTN 108
A + P+ K+G Q+ V N + TTN
Sbjct: 23 ANESEPLEVKFGLTLQQIIDVDEKNQILTTN 53
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 142 LLP*VTPLVPQTG 104
+LP TPLVPQ G
Sbjct: 235 MLPKPTPLVPQQG 247
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.4 bits (43), Expect = 3.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 167 GFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDE 45
GF Q++P + V+++NRP + ++ + +GDE
Sbjct: 52 GFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDE 92
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.4 bits (43), Expect = 3.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 167 GFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDE 45
GF Q++P + V+++NRP + ++ + +GDE
Sbjct: 53 GFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDE 93
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.4 bits (43), Expect = 3.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 167 GFRTSQLAPVAVSNTVSTTNRPIFGGANTGTFSPQSAAGDE 45
GF Q++P + V+++NRP + ++ + +GDE
Sbjct: 53 GFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDE 93
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 21.0 bits (42), Expect = 4.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 15 MKTSIVLIFLLVACCTLGAESTCICTTEY 101
MKT + L+F ++A + AE++ TT+Y
Sbjct: 1 MKTLVPLLFFVIAIASSLAENSKY-TTKY 28
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 21.0 bits (42), Expect = 4.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 110 NRPIFGGANTGTFSPQSAAGD 48
N P++GG N + Q+ D
Sbjct: 215 NSPLYGGVNESDWQQQNRNAD 235
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = -1
Query: 351 VSFNIFIKTKTIVIEQFEYGTESVPPRHFKLS 256
V + + K + E E+G E H K+S
Sbjct: 1033 VGYRLANSDKPYLFETVEFGREEGKEHHLKIS 1064
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.0 bits (42), Expect = 4.5
Identities = 7/16 (43%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = -1
Query: 117 YHKQAYIRWCK-YRYF 73
YHK+ Y ++C+ +YF
Sbjct: 29 YHKEKYRKFCRILKYF 44
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 20.6 bits (41), Expect = 5.9
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 310 RTVRIRNRV 284
RTVR+RNRV
Sbjct: 10 RTVRLRNRV 18
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 20.6 bits (41), Expect = 5.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +3
Query: 3 KSKTMKTSIVLIFLLVACCT 62
K +T+K +I+++ + C T
Sbjct: 270 KVRTLKMTIIIVLVFFVCWT 289
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 311 ITIVLVFINMLKLTCSSEKYQII 379
I IV + ++ K TC +KY I+
Sbjct: 410 IAIVDLSLDDFKGTCGRDKYDIL 432
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 20.6 bits (41), Expect = 5.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +3
Query: 3 KSKTMKTSIVLIFLLVACCT 62
K +T+K +I+++ + C T
Sbjct: 270 KVRTLKMTIIIVLVFFVCWT 289
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,818
Number of Sequences: 336
Number of extensions: 2469
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8541369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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