Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0969.Seq
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640705-1|CAE45825.1|  447|Homo sapiens hypothetical protein pr...    31   2.2  
BC106938-1|AAI06939.1|  576|Homo sapiens zinc finger protein 791...    30   6.6  
BC106937-1|AAI06938.1|  576|Homo sapiens zinc finger protein 791...    30   6.6  
AK074877-1|BAC11261.1|  576|Homo sapiens essor-4.  protein.            30   6.6  
AK131281-1|BAD18456.1|  692|Homo sapiens protein ( Homo sapiens ...    29   8.7  

>BX640705-1|CAE45825.1|  447|Homo sapiens hypothetical protein
           protein.
          Length = 447

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 367 RQHNTQNYFKWKHCKKT*IPPLWFLIPHLIHGGKKAGPTKCK 242
           R H  Q +++ K C KT + PL F      H G K  P +CK
Sbjct: 246 RNHTAQKHYECKLCGKTYLSPLGFQAHESTHTGDK--PFECK 285


>BC106938-1|AAI06939.1|  576|Homo sapiens zinc finger protein 791
           protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 361 HNTQNYFKWKHCKKT*IPPLWFLIPHLIHGGKKAGPTKCK 242
           HN    +K K C K  I P +  +   IH G+K  P KCK
Sbjct: 266 HNGDRPYKCKECGKAFIFPSFLRVHERIHTGEK--PYKCK 303


>BC106937-1|AAI06938.1|  576|Homo sapiens zinc finger protein 791
           protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 361 HNTQNYFKWKHCKKT*IPPLWFLIPHLIHGGKKAGPTKCK 242
           HN    +K K C K  I P +  +   IH G+K  P KCK
Sbjct: 266 HNGDRPYKCKECGKAFIFPSFLRVHERIHTGEK--PYKCK 303


>AK074877-1|BAC11261.1|  576|Homo sapiens essor-4.  protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 361 HNTQNYFKWKHCKKT*IPPLWFLIPHLIHGGKKAGPTKCK 242
           HN    +K K C K  I P +  +   IH G+K  P KCK
Sbjct: 266 HNGDRPYKCKECGKAFIFPSFLRVHERIHTGEK--PYKCK 303


>AK131281-1|BAD18456.1|  692|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16231 fis, clone FEBRA2027609, moderately
           similar to Zinc finger protein 91. ).
          Length = 692

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 394 VRAPLDAIVRQHNTQNYFKWKHCKKT*IPPLWFLIPHLIHGGKKAGPTKC 245
           V++ L+   R H  +  +K   C KT     +F+  H +H G+K  P KC
Sbjct: 591 VKSNLEGHRRIHTGEKPYKCNECGKTFSRKSYFICHHRLHTGEK--PYKC 638


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,182,780
Number of Sequences: 237096
Number of extensions: 1837374
Number of successful extensions: 2665
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2665
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)