Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0969.Seq
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 323 FTMFPLKIVLSVVLANYGV 379
           + M  LKIVLS +L N+ V
Sbjct: 493 YAMLKLKIVLSTILRNFRV 511


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 434 LHSGKVEPSKAIEISN 481
           L  GK++P+K + ISN
Sbjct: 254 LEDGKLKPNKKVRISN 269


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 355 CCAGELWRLVEPARRAPPT 411
           CC G + R  +PA R  P+
Sbjct: 408 CCPGRVRRRYQPAFRCKPS 426


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 298 FLIPHLIHGGKKAGPTKCKVWITINISTKGLACQLFVI-LCGI 173
           F + +L+ G    G   CK+W+T ++    L C   ++ LC I
Sbjct: 92  FNVAYLLLGKWIFGIHLCKLWLTCDV----LCCTASILNLCAI 130


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 298 FLIPHLIHGGKKAGPTKCKVWITINISTKGLACQLFVI-LCGI 173
           F + +L+ G    G   CK+W+T ++    L C   ++ LC I
Sbjct: 92  FNVAYLLLGKWIFGIHLCKLWLTCDV----LCCTASILNLCAI 130


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 298 FLIPHLIHGGKKAGPTKCKVWITINISTKGLACQLFVI-LCGI 173
           F + +L+ G    G   CK+W+T ++    L C   ++ LC I
Sbjct: 92  FNVAYLLLGKWIFGIHLCKLWLTCDV----LCCTASILNLCAI 130


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 242 FTFSRPCLLT 271
           FTF+RPC +T
Sbjct: 333 FTFTRPCGIT 342


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 489 KYEFEISIAFEGS 451
           KY +EIS AF G+
Sbjct: 268 KYSYEISNAFRGN 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,462
Number of Sequences: 438
Number of extensions: 3667
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)