Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0968.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   2.9  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   2.9  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   6.6  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   6.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.8  

>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 SMNVMSLRSC-VKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYNLINTFY 5
           ++ ++ + +C   ++  LM  +L S ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFS-ARNCFVESMLASGSLHQGMYNVLQEWY 131


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 SMNVMSLRSC-VKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYNLINTFY 5
           ++ ++ + +C   ++  LM  +L S ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFS-ARNCFVESMLASGSLHQGMYNVLQEWY 131


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 183 YVDLLTSGELELGT 224
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 183 YVDLLTSGELELGT 224
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -2

Query: 148  MSLRSCVKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYN 23
            M L++C      +M   L S + +  +++L   FR    +YN
Sbjct: 2391 MILKACTNLKEEMMKQKLFSESADAPVASLSEGFRKALQIYN 2432


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,727
Number of Sequences: 2352
Number of extensions: 11912
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)