BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0967.Seq (568 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 32 1.2 AK098423-1|BAC05305.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.6 AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 31 2.1 BC030023-1|AAH30023.1| 440|Homo sapiens glycosyltransferase 8 d... 31 3.7 AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like prot... 30 4.9 BC029877-1|AAH29877.1| 107|Homo sapiens Unknown (protein for MG... 29 8.6 >AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4 protein. Length = 1362 Score = 32.3 bits (70), Expect = 1.2 Identities = 22/54 (40%), Positives = 25/54 (46%) Frame = +3 Query: 75 KMYRPPAVPVTLIQTQTAQDPVHLVVAALMDTVPTVVMEVYHPPAVPVTLMQAQ 236 K RPPAV L QT P M P V++E PPA P+T MQ Q Sbjct: 883 KPARPPAVSPALTQTPLLPQPP-------MAQPPQVLLEDEEPPAPPLTSMQMQ 929 >AK098423-1|BAC05305.1| 485|Homo sapiens protein ( Homo sapiens cDNA FLJ25557 fis, clone JTH02756. ). Length = 485 Score = 31.9 bits (69), Expect = 1.6 Identities = 20/74 (27%), Positives = 33/74 (44%) Frame = +3 Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRPPAVPVTLIQTQTAQDPVHLVVAALMDTVPTV 182 ++T +V +++T+P ++M+ P V VT+IQT A A VP+ Sbjct: 374 METEEKEAGGSVMLILRTMPTLMMRTEDRPKVAVTMIQTAAAMGVASGAGATAAAPVPSP 433 Query: 183 VMEVYHPPAVPVTL 224 V P + V L Sbjct: 434 VAASTRPRRMAVKL 447 >AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ). Length = 710 Score = 31.5 bits (68), Expect = 2.1 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +3 Query: 60 PRVVMKMYRPPAVPVTLIQTQTAQDPVHLVVAA-LMDTVPTVVMEVYHPPAVPVTLMQAQ 236 P V PPAV T+ T+ AQ PV AA D+ + + HPP+ +++ + Sbjct: 251 PPVTTSNAIPPAVVATVSATR-AQSPVITTTAAHATDSALRPTLSIQHPPSAAISIQRPA 309 Query: 237 TLQDPVIR 260 +D R Sbjct: 310 QSRDVTTR 317 >BC030023-1|AAH30023.1| 440|Homo sapiens glycosyltransferase 8 domain containing 3 protein. Length = 440 Score = 30.7 bits (66), Expect = 3.7 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = -3 Query: 128 RCLSLNQCYWNCRWSIHFHHDSWNCLHESCYR 33 RC + CYWN W + NC E+ +R Sbjct: 74 RCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105 >AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like protein 1B protein. Length = 260 Score = 30.3 bits (65), Expect = 4.9 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -3 Query: 194 HFHHHSRNCIHKC-CYHQMYWI 132 ++HHH NC+H C+ ++WI Sbjct: 168 YYHHHRINCVHLYHCFTSLWWI 189 >BC029877-1|AAH29877.1| 107|Homo sapiens Unknown (protein for MGC:35221) protein. Length = 107 Score = 29.5 bits (63), Expect = 8.6 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = -1 Query: 304 FHHDCRNCIHK--CCYRRITGSCKVCACI 224 ++H C NC H C + R GS KV +C+ Sbjct: 39 YNHHCYNCHHHHHCYHCRTNGSSKVWSCV 67 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 71,681,534 Number of Sequences: 237096 Number of extensions: 1426933 Number of successful extensions: 3781 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3767 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 5759818212 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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