Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0967.Seq
(568 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3994|AAN14085.1| 118|Drosophila melanogaster CG31079-P... 30 1.9
EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein. 29 5.8
BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p pro... 29 5.8
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 29 5.8
>AE014297-3994|AAN14085.1| 118|Drosophila melanogaster CG31079-PA
protein.
Length = 118
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 8/45 (17%)
Frame = -1
Query: 334 CYWNCRWMIHF--HHDCRNCI------HKCCYRRITGSCKVCACI 224
C W CRW+ F H C I H C R+ C VC C+
Sbjct: 11 CRWRCRWLCRFGSGHICNTYIGMGVYKHMCVGARMRRVC-VCVCV 54
>EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 192
>BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p
protein.
Length = 1191
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 10 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 38
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 IQTAXDPGNPTVAALMKTVPRVVMKMYRP 89
IQT D G+P + L + VPR + YRP
Sbjct: 779 IQTGMDQGSPHNSTLNELVPRKPLDTYRP 807
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,625,910
Number of Sequences: 53049
Number of extensions: 434630
Number of successful extensions: 1412
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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