Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0966.Seq
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   1.0  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   4.1  
AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    23   4.1  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 324 CCXSHLGCQTSRRLVVARSLKLPKGHQGQE 235
           C  S LGC  ++R   A  L  P G  G E
Sbjct: 7   CAVSVLGCAYTQRTKCAACLDSPDGMNGNE 36


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 152 ATNSFLFYIFYKACNVTLFYNLYKV 78
           A   FLF   Y+   +T FY LY++
Sbjct: 291 AAQVFLFVAAYETNAITTFYCLYEL 315


>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 119 CKKYRKGMSL*PFFPSKHLLVNE 187
           C+KY K   L P  P K  +VN+
Sbjct: 73  CEKYGKNDGLYPKDPKKRAVVNQ 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,997
Number of Sequences: 2352
Number of extensions: 6079
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)