BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0965.Seq (449 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 73 3e-13 CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 73 3e-13 BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 73 3e-13 AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 73 3e-13 AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 73 3e-13 BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 0.60 AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 0.60 AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 0.60 AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 0.60 AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 0.60 U94780-1|AAB86593.1| 804|Homo sapiens MEA6 protein. 29 7.3 U73682-1|AAB86589.1| 776|Homo sapiens meningioma-expressed anti... 29 7.3 BC064355-1|AAH64355.1| 809|Homo sapiens CTAGE5 protein protein. 29 7.3 BC051363-1|AAH51363.2| 729|Homo sapiens CTAGE family, member 5 ... 29 7.3 AF338234-1|AAN77611.1| 771|Homo sapiens CTAGE-5B protein protein. 29 7.3 AF338233-1|AAN77610.1| 775|Homo sapiens CTAGE-5A protein protein. 29 7.3 AB209528-1|BAD92765.1| 808|Homo sapiens CTAGE family, member 5 ... 29 7.3 AB046802-1|BAB13408.2| 1740|Homo sapiens KIAA1582 protein protein. 29 7.3 >DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate dehydrogenase 2, NAD protein. Length = 305 Score = 73.3 bits (172), Expect = 3e-13 Identities = 36/64 (56%), Positives = 42/64 (65%) Frame = +3 Query: 255 LSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 434 LSH+ T A V G +K DV VIPAGVPRKPGMTRDDLFNTNA+IV + + Sbjct: 47 LSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAA 106 Query: 435 IAQN 446 AQ+ Sbjct: 107 CAQH 110 Score = 53.6 bits (123), Expect = 3e-07 Identities = 29/47 (61%), Positives = 32/47 (68%) Frame = +1 Query: 115 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAAD 255 Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAAD Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAAD 46 >CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. Length = 338 Score = 73.3 bits (172), Expect = 3e-13 Identities = 36/64 (56%), Positives = 42/64 (65%) Frame = +3 Query: 255 LSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 434 LSH+ T A V G +K DV VIPAGVPRKPGMTRDDLFNTNA+IV + + Sbjct: 68 LSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAA 127 Query: 435 IAQN 446 AQ+ Sbjct: 128 CAQH 131 Score = 64.9 bits (151), Expect = 1e-10 Identities = 36/71 (50%), Positives = 48/71 (67%) Frame = +1 Query: 43 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 222 M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57 Query: 223 IAPVTPGVAAD 255 IA TPGVAAD Sbjct: 58 IAH-TPGVAAD 67 >BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2, NAD (mitochondrial) protein. Length = 338 Score = 73.3 bits (172), Expect = 3e-13 Identities = 36/64 (56%), Positives = 42/64 (65%) Frame = +3 Query: 255 LSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 434 LSH+ T A V G +K DV VIPAGVPRKPGMTRDDLFNTNA+IV + + Sbjct: 68 LSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAA 127 Query: 435 IAQN 446 AQ+ Sbjct: 128 CAQH 131 Score = 64.1 bits (149), Expect = 2e-10 Identities = 36/71 (50%), Positives = 47/71 (66%) Frame = +1 Query: 43 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 222 M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57 Query: 223 IAPVTPGVAAD 255 IA TPGVAAD Sbjct: 58 IAH-TPGVAAD 67 >AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase precursor protein. Length = 338 Score = 73.3 bits (172), Expect = 3e-13 Identities = 36/64 (56%), Positives = 42/64 (65%) Frame = +3 Query: 255 LSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 434 LSH+ T A V G +K DV VIPAGVPRKPGMTRDDLFNTNA+IV + + Sbjct: 68 LSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAA 127 Query: 435 IAQN 446 AQ+ Sbjct: 128 CAQH 131 Score = 64.1 bits (149), Expect = 2e-10 Identities = 36/71 (50%), Positives = 47/71 (66%) Frame = +1 Query: 43 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 222 M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57 Query: 223 IAPVTPGVAAD 255 IA TPGVAAD Sbjct: 58 IAH-TPGVAAD 67 >AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. Length = 316 Score = 73.3 bits (172), Expect = 3e-13 Identities = 36/64 (56%), Positives = 42/64 (65%) Frame = +3 Query: 255 LSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 434 LSH+ T A V G +K DV VIPAGVPRKPGMTRDDLFNTNA+IV + + Sbjct: 46 LSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAA 105 Query: 435 IAQN 446 AQ+ Sbjct: 106 CAQH 109 Score = 51.6 bits (118), Expect = 1e-06 Identities = 26/33 (78%), Positives = 29/33 (87%) Frame = +1 Query: 157 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAAD 255 IGQPL+LLLK +PLV+RL LYDIA TPGVAAD Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAAD 45 >BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. Length = 627 Score = 32.7 bits (71), Expect = 0.60 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -2 Query: 139 RPPL*SSSVMWWKSSLHHFVQQ 74 RPPL SS WW+SSL +F QQ Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146 >AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens cDNA FLJ14786 fis, clone NT2RP4000737, moderately similar to Mus musculus F-box protein FBL10 mRNA. ). Length = 653 Score = 32.7 bits (71), Expect = 0.60 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -2 Query: 139 RPPL*SSSVMWWKSSLHHFVQQ 74 RPPL SS WW+SSL +F QQ Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172 >AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to Homo sapiens F-box protein Lilina (LILINA) mRNA. ). Length = 704 Score = 32.7 bits (71), Expect = 0.60 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -2 Query: 139 RPPL*SSSVMWWKSSLHHFVQQ 74 RPPL SS WW+SSL +F QQ Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223 >AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. Length = 1336 Score = 32.7 bits (71), Expect = 0.60 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -2 Query: 139 RPPL*SSSVMWWKSSLHHFVQQ 74 RPPL SS WW+SSL +F QQ Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855 >AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC domain 2 protein. Length = 827 Score = 32.7 bits (71), Expect = 0.60 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -2 Query: 139 RPPL*SSSVMWWKSSLHHFVQQ 74 RPPL SS WW+SSL +F QQ Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379 >U94780-1|AAB86593.1| 804|Homo sapiens MEA6 protein. Length = 804 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 617 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 674 >U73682-1|AAB86589.1| 776|Homo sapiens meningioma-expressed antigen 11 protein. Length = 776 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 589 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 646 >BC064355-1|AAH64355.1| 809|Homo sapiens CTAGE5 protein protein. Length = 809 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 622 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 679 >BC051363-1|AAH51363.2| 729|Homo sapiens CTAGE family, member 5 protein. Length = 729 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 542 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 599 >AF338234-1|AAN77611.1| 771|Homo sapiens CTAGE-5B protein protein. Length = 771 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 617 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 674 >AF338233-1|AAN77610.1| 775|Homo sapiens CTAGE-5A protein protein. Length = 775 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 588 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 645 >AB209528-1|BAD92765.1| 808|Homo sapiens CTAGE family, member 5 isoform 1 variant protein. Length = 808 Score = 29.1 bits (62), Expect = 7.3 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 225 SACDPRRRSRLSHMNTPAKVSGTRDLRSYQAAIKDADVXVIPAGVPRKPGMTRDDLFNTN 404 SA P+R+ R + ++SG +LRS+ D +P+ + T+DDL N N Sbjct: 621 SALPPQRQDRFC--SNSGRLSGPAELRSFNMPSLDKMDGSMPSEMESSRNDTKDDLGNLN 678 >AB046802-1|BAB13408.2| 1740|Homo sapiens KIAA1582 protein protein. Length = 1740 Score = 29.1 bits (62), Expect = 7.3 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 356 SCWDDXNISIFDGCLIAPQVPCAADLGWGVHVGKSAATPGVTG 228 S + N S G + AP A+ GWG K+ + PGV G Sbjct: 546 SIMNSTNTSSVSGWVNAPPAAVPANTGWGDSNNKAPSGPGVWG 588 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 71,730,814 Number of Sequences: 237096 Number of extensions: 1752684 Number of successful extensions: 3809 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3809 length of database: 76,859,062 effective HSP length: 84 effective length of database: 56,942,998 effective search space used: 3701294870 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -