BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0908.Seq (289 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4JSC0 Cluster: Actin; n=13; Coelomata|Rep: Actin - Ano... 68 3e-11 UniRef50_O65314 Cluster: Actin; n=20; Eukaryota|Rep: Actin - Sch... 58 4e-08 UniRef50_P14883 Cluster: Actin-2; n=75; Eukaryota|Rep: Actin-2 -... 52 2e-06 UniRef50_P02581 Cluster: Actin-1; n=1852; Eukaryota|Rep: Actin-1... 50 7e-06 UniRef50_Q00UL2 Cluster: Alpha amylase 1; n=3; Ostreococcus|Rep:... 46 2e-04 UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1; ... 44 5e-04 UniRef50_Q8LKR2 Cluster: Actin-related protein 4; n=7; core eudi... 43 0.001 UniRef50_A7RPC3 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 42 0.003 UniRef50_UPI0001554F81 Cluster: PREDICTED: similar to actin; n=1... 41 0.006 UniRef50_A3BPG0 Cluster: Putative uncharacterized protein; n=3; ... 41 0.006 UniRef50_A4QNT8 Cluster: Si:ch211-241j12.3 protein; n=3; Danio r... 40 0.011 UniRef50_UPI0000449751 Cluster: PREDICTED: similar to gamma-acti... 39 0.024 UniRef50_A4S826 Cluster: Predicted protein; n=1; Ostreococcus lu... 39 0.024 UniRef50_Q9XZB9 Cluster: Actin; n=1; Sterkiella nova|Rep: Actin ... 39 0.024 UniRef50_Q5C683 Cluster: SJCHGC08418 protein; n=1; Schistosoma j... 38 0.043 UniRef50_A2DKQ5 Cluster: Actin 58, putative; n=2; Trichomonas va... 38 0.043 UniRef50_P61163 Cluster: Alpha-centractin; n=356; root|Rep: Alph... 38 0.057 UniRef50_UPI00015B6274 Cluster: PREDICTED: similar to putative m... 37 0.075 UniRef50_Q7M3Y5 Cluster: Actin; n=1; Aplysia californica|Rep: Ac... 37 0.099 UniRef50_UPI000065FC19 Cluster: Homolog of Homo sapiens "Actin, ... 36 0.17 UniRef50_A0E1S8 Cluster: Chromosome undetermined scaffold_73, wh... 36 0.17 UniRef50_Q2GY63 Cluster: Putative uncharacterized protein; n=1; ... 36 0.17 UniRef50_Q5C3R3 Cluster: SJCHGC08022 protein; n=1; Schistosoma j... 36 0.23 UniRef50_Q5KB93 Cluster: Actin binding protein, putative; n=3; F... 36 0.23 UniRef50_Q17GZ9 Cluster: Actin-related protein 5; n=4; Endoptery... 36 0.23 UniRef50_A5E2K2 Cluster: Actin; n=5; Saccharomycetales|Rep: Acti... 35 0.30 UniRef50_Q4N681 Cluster: Actin, putative; n=3; Piroplasmida|Rep:... 35 0.40 UniRef50_O96819 Cluster: Actin-related protein; n=5; Trypanosoma... 34 0.53 UniRef50_Q5CKL2 Cluster: BRG1/brm-associated factor 53A; n=2; Cr... 34 0.70 UniRef50_Q4CV94 Cluster: Actin 2, putative; n=2; Trypanosoma cru... 34 0.70 UniRef50_UPI00005A2ACF Cluster: PREDICTED: similar to cytoplasmi... 33 0.92 UniRef50_UPI0000588EB0 Cluster: PREDICTED: similar to actin; n=1... 33 0.92 UniRef50_A2EUM6 Cluster: Actin family protein; n=1; Trichomonas ... 33 1.2 UniRef50_Q96483 Cluster: Actin-51; n=584; Eukaryota|Rep: Actin-5... 33 1.2 UniRef50_Q0J646 Cluster: Os08g0369300 protein; n=2; Oryza sativa... 33 1.6 UniRef50_A2YUL5 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6 UniRef50_Q4WA13 Cluster: Chromatin remodeling complex subunit (A... 33 1.6 UniRef50_Q7SXV8 Cluster: ARP5 actin-related protein 5 homolog; n... 32 2.1 UniRef50_Q2PE20 Cluster: CG10067-PB, isoform B; n=1; Drosophila ... 32 2.1 UniRef50_UPI0000F2D272 Cluster: PREDICTED: similar to actin; n=1... 32 2.8 UniRef50_Q24C02 Cluster: Actin family protein; n=3; Oligohymenop... 32 2.8 UniRef50_Q22WQ4 Cluster: Actin family protein; n=1; Tetrahymena ... 32 2.8 UniRef50_Q8TDY3 Cluster: Actin-related protein T2; n=26; Amniota... 32 2.8 UniRef50_Q8IIQ4 Cluster: Actin, putative; n=7; Apicomplexa|Rep: ... 31 3.7 UniRef50_Q5KLG9 Cluster: 53 kDa brg1-associated factor b (Actin-... 31 3.7 UniRef50_Q2H0E9 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7 UniRef50_O96019 Cluster: Actin-like protein 6A; n=63; Eumetazoa|... 31 3.7 UniRef50_UPI0000605B09 Cluster: PREDICTED: similar to actin alph... 31 4.9 UniRef50_UPI00001E426E Cluster: PREDICTED: similar to actin-12; ... 31 4.9 UniRef50_A4RW28 Cluster: Predicted protein; n=2; Ostreococcus|Re... 31 4.9 UniRef50_Q7M3B0 Cluster: Actin beta; n=1; Sus scrofa domestica|R... 31 4.9 UniRef50_A2FRF9 Cluster: Actin family protein; n=1; Trichomonas ... 31 4.9 UniRef50_A2DBN6 Cluster: Actin family protein; n=1; Trichomonas ... 31 4.9 UniRef50_Q6BIA3 Cluster: CA5059|IPF3691 Candida albicans IPF3691... 31 4.9 UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9 UniRef50_Q9P7X7 Cluster: Actin-related protein 4; n=1; Schizosac... 31 4.9 UniRef50_UPI0000D9A391 Cluster: PREDICTED: actin related protein... 31 6.5 UniRef50_Q12HW8 Cluster: Collagen triple helix repeat precursor;... 31 6.5 UniRef50_Q0LE69 Cluster: Extracellular solute-binding protein, f... 31 6.5 UniRef50_Q54E71 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5 UniRef50_Q9BYD9 Cluster: Actin-related protein M1; n=12; Theria|... 31 6.5 UniRef50_UPI0000F2D326 Cluster: PREDICTED: similar to actin; n=1... 30 8.6 UniRef50_UPI0000E47BC7 Cluster: PREDICTED: similar to ubiquitin/... 30 8.6 UniRef50_UPI00005864C8 Cluster: PREDICTED: similar to Actin; n=4... 30 8.6 UniRef50_UPI000049A548 Cluster: actin; n=1; Entamoeba histolytic... 30 8.6 UniRef50_Q7QA11 Cluster: ENSANGP00000003921; n=1; Anopheles gamb... 30 8.6 >UniRef50_Q4JSC0 Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito) Length = 376 Score = 68.1 bits (159), Expect = 3e-11 Identities = 30/40 (75%), Positives = 32/40 (80%) Frame = +3 Query: 66 MCDEEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 MCD++ ALVVDNGSGMCKAGF DDAP A PSIV RPR Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40 Score = 35.1 bits (77), Expect = 0.30 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 173 GKAPHXGVMVXMGXKDSYVRXEAHEQXSXLT 265 G+ H GVMV MG KD+YV EA + LT Sbjct: 37 GRPRHQGVMVGMGNKDAYVGDEAQSKRGILT 67 >UniRef50_O65314 Cluster: Actin; n=20; Eukaryota|Rep: Actin - Scherffelia dubia Length = 378 Score = 58.0 bits (134), Expect = 4e-08 Identities = 28/38 (73%), Positives = 29/38 (76%) Frame = +3 Query: 72 DEEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 D EV+ALV DNGSGM KAGF DDAP A PSIV RPR Sbjct: 5 DGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPR 42 Score = 35.1 bits (77), Expect = 0.30 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 173 GKAPHXGVMVXMGXKDSYVRXEAHEQXSXLT 265 G+ H GVMV MG KD+YV EA + LT Sbjct: 39 GRPRHQGVMVGMGQKDAYVGDEAQSKRGILT 69 >UniRef50_P14883 Cluster: Actin-2; n=75; Eukaryota|Rep: Actin-2 - Plasmodium falciparum Length = 376 Score = 52.4 bits (120), Expect = 2e-06 Identities = 24/38 (63%), Positives = 27/38 (71%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRI 188 EE ALVVDNGSGM K+G DDAP PSIV RP++ Sbjct: 3 EEAVALVVDNGSGMVKSGLAGDDAPKCVFPSIVGRPKM 40 >UniRef50_P02581 Cluster: Actin-1; n=1852; Eukaryota|Rep: Actin-1 - Glycine max (Soybean) Length = 377 Score = 50.4 bits (115), Expect = 7e-06 Identities = 23/37 (62%), Positives = 26/37 (70%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 E++ LV DNG+GM KAG DDAP A PSIV RPR Sbjct: 5 EDIQPLVCDNGTGMVKAGLAGDDAPRAVFPSIVGRPR 41 >UniRef50_Q00UL2 Cluster: Alpha amylase 1; n=3; Ostreococcus|Rep: Alpha amylase 1 - Ostreococcus tauri Length = 913 Score = 45.6 bits (103), Expect = 2e-04 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = -1 Query: 169 IEGNSAXGASSXXKPALHIPEPLSTTNAATSSS 71 ++GN+A GASS KPAL IPEPLS T+A TS S Sbjct: 1 MDGNTAFGASSPAKPALTIPEPLSHTSAETSPS 33 >UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1; Bigelowiella natans|Rep: Ubiquitin/actin fusion protein 4 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 234 Score = 44.4 bits (100), Expect = 5e-04 Identities = 21/38 (55%), Positives = 23/38 (60%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRI 188 EE LVVDNGS M KAGF D AP PS+ PR+ Sbjct: 78 EECQPLVVDNGSDMIKAGFAGDGAPRTAFPSVFKVPRV 115 >UniRef50_Q8LKR2 Cluster: Actin-related protein 4; n=7; core eudicotyledons|Rep: Actin-related protein 4 - Arabidopsis thaliana (Mouse-ear cress) Length = 442 Score = 43.2 bits (97), Expect = 0.001 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 +EV+A+VVD GS CKAG+ +DAP A PS++ Sbjct: 6 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVI 38 >UniRef50_A7RPC3 Cluster: Predicted protein; n=3; Eumetazoa|Rep: Predicted protein - Nematostella vectensis Length = 64 Score = 41.5 bits (93), Expect = 0.003 Identities = 20/33 (60%), Positives = 21/33 (63%) Frame = +3 Query: 87 ALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 ALV+D GS M K GF DDAP P IV RPR Sbjct: 1 ALVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPR 33 Score = 37.9 bits (84), Expect = 0.043 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +2 Query: 173 GKAPHXGVMVXMGXKDSYVRXEAHEQXSXLT 265 G+ H GVMV MG KDSYV EAH + L+ Sbjct: 30 GRPRHQGVMVGMGQKDSYVGWEAHSKRGILS 60 >UniRef50_UPI0001554F81 Cluster: PREDICTED: similar to actin; n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to actin - Ornithorhynchus anatinus Length = 376 Score = 40.7 bits (91), Expect = 0.006 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +3 Query: 81 VAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 + LV+DNG+G+CKAGF D+AP P+ V Sbjct: 1 MTTLVIDNGTGLCKAGFAGDNAPKLVVPTAV 31 >UniRef50_A3BPG0 Cluster: Putative uncharacterized protein; n=3; Oryza sativa|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 467 Score = 40.7 bits (91), Expect = 0.006 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSI 170 +EV+A+V+D GS CKAG+ DD P A PS+ Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36 >UniRef50_A4QNT8 Cluster: Si:ch211-241j12.3 protein; n=3; Danio rerio|Rep: Si:ch211-241j12.3 protein - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 389 Score = 39.9 bits (89), Expect = 0.011 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+D+GSG+ KAGF D P A P+++ RP+ Sbjct: 25 IVLDSGSGLMKAGFADQDLPAAVFPTVIGRPK 56 >UniRef50_UPI0000449751 Cluster: PREDICTED: similar to gamma-actin; n=3; Amniota|Rep: PREDICTED: similar to gamma-actin - Gallus gallus Length = 377 Score = 38.7 bits (86), Expect = 0.024 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V DNGSG CKAG + AP + P+IV P+ Sbjct: 12 VVFDNGSGQCKAGLSGEQAPRSVIPTIVGYPK 43 >UniRef50_A4S826 Cluster: Predicted protein; n=1; Ostreococcus lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus lucimarinus CCE9901 Length = 346 Score = 38.7 bits (86), Expect = 0.024 Identities = 19/27 (70%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = +3 Query: 66 MCDE-EVAALVVDNGSGMCKAGFXXDD 143 M DE E++ALV DNGSGM KAGF DD Sbjct: 1 MADEGELSALVCDNGSGMVKAGFAGDD 27 >UniRef50_Q9XZB9 Cluster: Actin; n=1; Sterkiella nova|Rep: Actin - Oxytricha nova Length = 374 Score = 38.7 bits (86), Expect = 0.024 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 E +V+DNGSG KAGF +D P ++V RP+ Sbjct: 2 ESSKTIVIDNGSGFVKAGFVGEDGPSVVLRNLVGRPK 38 >UniRef50_Q5C683 Cluster: SJCHGC08418 protein; n=1; Schistosoma japonicum|Rep: SJCHGC08418 protein - Schistosoma japonicum (Blood fluke) Length = 106 Score = 37.9 bits (84), Expect = 0.043 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRIXA*WSXW 209 +VVDNG+G KAG+ D P P ++ RP+ + ++ W Sbjct: 9 IVVDNGAGHLKAGYAGDGGPRILVPMLIGRPKKCSKYTDW 48 >UniRef50_A2DKQ5 Cluster: Actin 58, putative; n=2; Trichomonas vaginalis G3|Rep: Actin 58, putative - Trichomonas vaginalis G3 Length = 373 Score = 37.9 bits (84), Expect = 0.043 Identities = 14/32 (43%), Positives = 23/32 (71%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+DNG+G+ KAGF +AP + P+I+ P+ Sbjct: 6 IVIDNGTGLTKAGFAGAEAPKSVFPTIIGSPK 37 >UniRef50_P61163 Cluster: Alpha-centractin; n=356; root|Rep: Alpha-centractin - Homo sapiens (Human) Length = 376 Score = 37.5 bits (83), Expect = 0.057 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+DNGSG+ KAGF D P P+ V RP+ Sbjct: 12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPK 43 >UniRef50_UPI00015B6274 Cluster: PREDICTED: similar to putative mRNA splicing factor; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to putative mRNA splicing factor - Nasonia vitripennis Length = 515 Score = 37.1 bits (82), Expect = 0.075 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = -3 Query: 185 AGPXHDRGXLGARSIISXETGLAHTGAIVYYQRGNFFVAH 66 AGP D G+R +++ ET LAH+ +IV ++ G VAH Sbjct: 471 AGPADDGWKDGSRRVVAGETSLAHSRSIVNHESGYVVVAH 510 >UniRef50_Q7M3Y5 Cluster: Actin; n=1; Aplysia californica|Rep: Actin - Aplysia californica (California sea hare) Length = 92 Score = 36.7 bits (81), Expect = 0.099 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = +3 Query: 81 VAALVVDNGSGMCKAGFXXD 140 VAALVVDNGSGM KAGF D Sbjct: 1 VAALVVDNGSGMXKAGFAGD 20 >UniRef50_UPI000065FC19 Cluster: Homolog of Homo sapiens "Actin, cytoplasmic 2; n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens "Actin, cytoplasmic 2 - Takifugu rubripes Length = 396 Score = 35.9 bits (79), Expect = 0.17 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+D GSG KAGF +D P P+I+ P+ Sbjct: 2 IVLDTGSGFMKAGFADEDLPNVVFPTIIGMPK 33 >UniRef50_A0E1S8 Cluster: Chromosome undetermined scaffold_73, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_73, whole genome shotgun sequence - Paramecium tetraurelia Length = 383 Score = 35.9 bits (79), Expect = 0.17 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRI 188 +V+DNGS KAGF AP P++V RP++ Sbjct: 11 IVIDNGSYELKAGFQGHYAPSCRIPTVVGRPKL 43 >UniRef50_Q2GY63 Cluster: Putative uncharacterized protein; n=1; Chaetomium globosum|Rep: Putative uncharacterized protein - Chaetomium globosum (Soil fungus) Length = 350 Score = 35.9 bits (79), Expect = 0.17 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 87 ALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 A+V+DNGSG +AG+ + P PS V RP+ Sbjct: 9 AVVLDNGSGNIRAGYSGESEPKVNFPSWVGRPK 41 >UniRef50_Q5C3R3 Cluster: SJCHGC08022 protein; n=1; Schistosoma japonicum|Rep: SJCHGC08022 protein - Schistosoma japonicum (Blood fluke) Length = 209 Score = 35.5 bits (78), Expect = 0.23 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRI 188 +V+DNG+ C+AG+ + P P++V RPR+ Sbjct: 39 IVIDNGNFECRAGYSNFEKPHMTFPNVVYRPRM 71 >UniRef50_Q5KB93 Cluster: Actin binding protein, putative; n=3; Filobasidiella neoformans|Rep: Actin binding protein, putative - Cryptococcus neoformans (Filobasidiella neoformans) Length = 390 Score = 35.5 bits (78), Expect = 0.23 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRIXA 194 LVVDNG+G K G+ + P PSIV RP + A Sbjct: 7 LVVDNGTGFVKCGWAGSNFPDYVFPSIVGRPILRA 41 >UniRef50_Q17GZ9 Cluster: Actin-related protein 5; n=4; Endopterygota|Rep: Actin-related protein 5 - Aedes aegypti (Yellowfever mosquito) Length = 655 Score = 35.5 bits (78), Expect = 0.23 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +3 Query: 84 AALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 AA+V+DNGS C+AG+ D P +++ +PR Sbjct: 28 AAIVIDNGSYHCRAGWAGKDVPSLVFKNVLAKPR 61 >UniRef50_A5E2K2 Cluster: Actin; n=5; Saccharomycetales|Rep: Actin - Lodderomyces elongisporus (Yeast) (Saccharomyces elongisporus) Length = 417 Score = 35.1 bits (77), Expect = 0.30 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +VVDNG G KAGF ++ P SI+ RP+ Sbjct: 10 VVVDNGLGTLKAGFAGEEKPRTYASSIIGRPK 41 >UniRef50_Q4N681 Cluster: Actin, putative; n=3; Piroplasmida|Rep: Actin, putative - Theileria parva Length = 380 Score = 34.7 bits (76), Expect = 0.40 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 +E AL++D GS + KAGF + P P++V Sbjct: 3 DETLALIIDTGSAVTKAGFAGSETPKVRFPTLV 35 >UniRef50_O96819 Cluster: Actin-related protein; n=5; Trypanosoma|Rep: Actin-related protein - Trypanosoma brucei Length = 433 Score = 34.3 bits (75), Expect = 0.53 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +3 Query: 66 MCDEEVAALVV-DNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +C E A +V+ D GS +AG+ D AP + P++V PR Sbjct: 2 VCSTERAPVVILDGGSHHLRAGYASDGAPRLDIPALVGHPR 42 >UniRef50_Q5CKL2 Cluster: BRG1/brm-associated factor 53A; n=2; Cryptosporidium|Rep: BRG1/brm-associated factor 53A - Cryptosporidium hominis Length = 423 Score = 33.9 bits (74), Expect = 0.70 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 ++V A++VD GS M K G+ +D P PS+V Sbjct: 11 DDVGAIIVDVGSYMTKIGYGGEDCPRQVWPSVV 43 >UniRef50_Q4CV94 Cluster: Actin 2, putative; n=2; Trypanosoma cruzi|Rep: Actin 2, putative - Trypanosoma cruzi Length = 392 Score = 33.9 bits (74), Expect = 0.70 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSI 170 +E A+V+DNGSG K GF ++ P PS+ Sbjct: 7 DEEPAVVLDNGSGNIKCGFAGEEIPRCVFPSV 38 >UniRef50_UPI00005A2ACF Cluster: PREDICTED: similar to cytoplasmic beta-actin; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to cytoplasmic beta-actin - Canis familiaris Length = 268 Score = 33.5 bits (73), Expect = 0.92 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +2 Query: 176 KAPHXGVMVXMGXKDSYVRXEAHEQXSXLT 265 KA +MV MG KDSY+R EA + LT Sbjct: 91 KAKDLSIMVGMGQKDSYIRNEAQRKWGILT 120 >UniRef50_UPI0000588EB0 Cluster: PREDICTED: similar to actin; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to actin - Strongylocentrotus purpuratus Length = 386 Score = 33.5 bits (73), Expect = 0.92 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+D+GS +AGF +D P SIV RPR Sbjct: 14 MVIDHGSFEIQAGFAEEDCPRTVFQSIVGRPR 45 >UniRef50_A2EUM6 Cluster: Actin family protein; n=1; Trichomonas vaginalis G3|Rep: Actin family protein - Trichomonas vaginalis G3 Length = 360 Score = 33.1 bits (72), Expect = 1.2 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 LV+D GSG KAGF +D+P P++V R Sbjct: 8 LVLDFGSGFVKAGFAGNDSPSLVFPTVVGNLR 39 >UniRef50_Q96483 Cluster: Actin-51; n=584; Eukaryota|Rep: Actin-51 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum) Length = 336 Score = 33.1 bits (72), Expect = 1.2 Identities = 15/21 (71%), Positives = 15/21 (71%) Frame = +3 Query: 123 AGFXXDDAPXAEXPSIVXRPR 185 AGF DDAP A PSIV RPR Sbjct: 1 AGFAGDDAPRAVFPSIVGRPR 21 Score = 32.3 bits (70), Expect = 2.1 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 173 GKAPHXGVMVXMGXKDSYVRXEAHEQXSXLT 265 G+ H GVMV MG KD+Y EA + LT Sbjct: 18 GRPRHTGVMVGMGQKDAYDGDEAQSKRGILT 48 >UniRef50_Q0J646 Cluster: Os08g0369300 protein; n=2; Oryza sativa (japonica cultivar-group)|Rep: Os08g0369300 protein - Oryza sativa subsp. japonica (Rice) Length = 495 Score = 32.7 bits (71), Expect = 1.6 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRP 182 +V DNG+G K GF ++ P + P +V RP Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37 >UniRef50_A2YUL5 Cluster: Putative uncharacterized protein; n=1; Oryza sativa (indica cultivar-group)|Rep: Putative uncharacterized protein - Oryza sativa subsp. indica (Rice) Length = 367 Score = 32.7 bits (71), Expect = 1.6 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRP 182 +V DNG+G K GF ++ P + P +V RP Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37 >UniRef50_Q4WA13 Cluster: Chromatin remodeling complex subunit (Arp5), putative; n=14; Pezizomycotina|Rep: Chromatin remodeling complex subunit (Arp5), putative - Aspergillus fumigatus (Sartorya fumigata) Length = 757 Score = 32.7 bits (71), Expect = 1.6 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +3 Query: 84 AALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +A+V+DNGS + KAG+ D +P P ++ R R Sbjct: 59 SAIVIDNGSSLLKAGWSFDVSPRFILPPVMSRYR 92 >UniRef50_Q7SXV8 Cluster: ARP5 actin-related protein 5 homolog; n=6; Euteleostomi|Rep: ARP5 actin-related protein 5 homolog - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 592 Score = 32.3 bits (70), Expect = 2.1 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRP 182 +VVDNGS C+AG+ AP + P +V RP Sbjct: 35 VVVDNGSFQCRAGW-SSGAPELDNPRLVFRP 64 >UniRef50_Q2PE20 Cluster: CG10067-PB, isoform B; n=1; Drosophila melanogaster|Rep: CG10067-PB, isoform B - Drosophila melanogaster (Fruit fly) Length = 36 Score = 32.3 bits (70), Expect = 2.1 Identities = 13/15 (86%), Positives = 15/15 (100%) Frame = +3 Query: 66 MCDEEVAALVVDNGS 110 MCD+EVAALVVDNG+ Sbjct: 1 MCDDEVAALVVDNGA 15 >UniRef50_UPI0000F2D272 Cluster: PREDICTED: similar to actin; n=1; Monodelphis domestica|Rep: PREDICTED: similar to actin - Monodelphis domestica Length = 790 Score = 31.9 bits (69), Expect = 2.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 E +++V+D GS CKAG ++ P PS+V Sbjct: 68 ESSSVVIDIGSAWCKAGLAMENYPTLAVPSVV 99 Score = 31.5 bits (68), Expect = 3.7 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 E + LVVD GS CKAG+ + P PS+V Sbjct: 423 ERSCLVVDIGSACCKAGWCGEKFPPIIVPSVV 454 >UniRef50_Q24C02 Cluster: Actin family protein; n=3; Oligohymenophorea|Rep: Actin family protein - Tetrahymena thermophila SB210 Length = 398 Score = 31.9 bits (69), Expect = 2.8 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+DNGSG+ +AG +D + S + RP+ Sbjct: 13 VVIDNGSGIIRAGIAGEDKAKLQFDSYIGRPK 44 >UniRef50_Q22WQ4 Cluster: Actin family protein; n=1; Tetrahymena thermophila SB210|Rep: Actin family protein - Tetrahymena thermophila SB210 Length = 444 Score = 31.9 bits (69), Expect = 2.8 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 66 MCDEEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 M E++ A+VVD GS +AG+ +D P PS V Sbjct: 1 MFTEDITAIVVDPGSLSIRAGYSGEDTPRLVMPSQV 36 >UniRef50_Q8TDY3 Cluster: Actin-related protein T2; n=26; Amniota|Rep: Actin-related protein T2 - Homo sapiens (Human) Length = 377 Score = 31.9 bits (69), Expect = 2.8 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 87 ALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPRIXA 194 A++ DNGSG CKAG + P SIV + A Sbjct: 11 AVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQA 46 >UniRef50_Q8IIQ4 Cluster: Actin, putative; n=7; Apicomplexa|Rep: Actin, putative - Plasmodium falciparum (isolate 3D7) Length = 392 Score = 31.5 bits (68), Expect = 3.7 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 E +V+DNGSG KAG + P P+IV Sbjct: 2 ENKTIVIDNGSGYIKAGINSSEEPTIVFPTIV 33 >UniRef50_Q5KLG9 Cluster: 53 kDa brg1-associated factor b (Actin-related protein baf53b), putative; n=1; Filobasidiella neoformans|Rep: 53 kDa brg1-associated factor b (Actin-related protein baf53b), putative - Cryptococcus neoformans (Filobasidiella neoformans) Length = 476 Score = 31.5 bits (68), Expect = 3.7 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPS 167 +EV+ALV+D GS +AG+ +D P PS Sbjct: 6 DEVSALVLDFGSYTTRAGYAGEDCPRVVCPS 36 >UniRef50_Q2H0E9 Cluster: Putative uncharacterized protein; n=1; Chaetomium globosum|Rep: Putative uncharacterized protein - Chaetomium globosum (Soil fungus) Length = 656 Score = 31.5 bits (68), Expect = 3.7 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +3 Query: 84 AALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 A +V+DNGS +AG+ +D P P I+ + R Sbjct: 54 AVIVIDNGSSTVRAGWSFEDKPRLAIPPIMSKYR 87 >UniRef50_O96019 Cluster: Actin-like protein 6A; n=63; Eumetazoa|Rep: Actin-like protein 6A - Homo sapiens (Human) Length = 429 Score = 31.5 bits (68), Expect = 3.7 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 +EV ALV D GS +AG+ +D P + P+ + Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAI 41 >UniRef50_UPI0000605B09 Cluster: PREDICTED: similar to actin alpha 1 skeletal muscle protein; n=1; Mus musculus|Rep: PREDICTED: similar to actin alpha 1 skeletal muscle protein - Mus musculus Length = 255 Score = 31.1 bits (67), Expect = 4.9 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXR 179 E LV D GSG K GF AP A P+I+ + Sbjct: 2 EKTPLVCDYGSGFSKVGFSGTQAPQAVFPTILGK 35 >UniRef50_UPI00001E426E Cluster: PREDICTED: similar to actin-12; n=11; Eutheria|Rep: PREDICTED: similar to actin-12 - Mus musculus Length = 372 Score = 31.1 bits (67), Expect = 4.9 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXR 179 E LV D GSG K GF AP A P+I+ + Sbjct: 2 EKTPLVCDYGSGFSKVGFSGTQAPQAVFPTILGK 35 >UniRef50_A4RW28 Cluster: Predicted protein; n=2; Ostreococcus|Rep: Predicted protein - Ostreococcus lucimarinus CCE9901 Length = 425 Score = 31.1 bits (67), Expect = 4.9 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 +EV+A+V+D G+ KAG+ D P PS V Sbjct: 5 DEVSAVVIDLGTHSVKAGYAGQDTPQHVFPSAV 37 >UniRef50_Q7M3B0 Cluster: Actin beta; n=1; Sus scrofa domestica|Rep: Actin beta - Sus scrofa domestica (domestic pig) Length = 195 Score = 31.1 bits (67), Expect = 4.9 Identities = 14/20 (70%), Positives = 14/20 (70%) Frame = +3 Query: 123 AGFXXDDAPXAEXPSIVXRP 182 AGF DDAP A PSIV RP Sbjct: 1 AGFAGDDAPRAVFPSIVGRP 20 >UniRef50_A2FRF9 Cluster: Actin family protein; n=1; Trichomonas vaginalis G3|Rep: Actin family protein - Trichomonas vaginalis G3 Length = 543 Score = 31.1 bits (67), Expect = 4.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+D GSG K GF P E P++V P+ Sbjct: 6 VVIDTGSGFTKVGFAGYYEPKVEFPTVVGVPK 37 >UniRef50_A2DBN6 Cluster: Actin family protein; n=1; Trichomonas vaginalis G3|Rep: Actin family protein - Trichomonas vaginalis G3 Length = 373 Score = 31.1 bits (67), Expect = 4.9 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXR 179 EV+ +V+D G+ +AGF D P P+++ R Sbjct: 2 EVSTIVIDTGAYSTRAGFGGDSDPQCILPTVIGR 35 >UniRef50_Q6BIA3 Cluster: CA5059|IPF3691 Candida albicans IPF3691; n=5; Saccharomycetales|Rep: CA5059|IPF3691 Candida albicans IPF3691 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 450 Score = 31.1 bits (67), Expect = 4.9 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +3 Query: 87 ALVVDNGSGMCKAGFXXDDAP 149 A+V+DNGS KAGF DD P Sbjct: 7 AVVIDNGSHTTKAGFALDDLP 27 >UniRef50_A6RD01 Cluster: Putative uncharacterized protein; n=1; Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized protein - Ajellomyces capsulatus NAm1 Length = 762 Score = 31.1 bits (67), Expect = 4.9 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 84 AALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +A+V+DNGS + KAG+ D +P P ++ + R Sbjct: 111 SAIVIDNGSYLVKAGWSFDKSPRFIIPPVMAKYR 144 >UniRef50_Q9P7X7 Cluster: Actin-related protein 4; n=1; Schizosaccharomyces pombe|Rep: Actin-related protein 4 - Schizosaccharomyces pombe (Fission yeast) Length = 433 Score = 31.1 bits (67), Expect = 4.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 75 EEVAALVVDNGSGMCKAGFXXDDAPXAEXPS 167 +EV+A+V+D GS + GF +D P PS Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPS 39 >UniRef50_UPI0000D9A391 Cluster: PREDICTED: actin related protein M1 isoform 1; n=1; Macaca mulatta|Rep: PREDICTED: actin related protein M1 isoform 1 - Macaca mulatta Length = 319 Score = 30.7 bits (66), Expect = 6.5 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+DNGSG+ KAG P P+I+ R + Sbjct: 71 VVIDNGSGVIKAGLAGSREPQFIYPNIIGRAK 102 >UniRef50_Q12HW8 Cluster: Collagen triple helix repeat precursor; n=2; Shewanella denitrificans OS217|Rep: Collagen triple helix repeat precursor - Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) Length = 493 Score = 30.7 bits (66), Expect = 6.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 115 CARPVSXEMMLLAPSXPRSWXGPASXRDGXYGTXG 219 C P+S E ++AP PR + GPA + G G G Sbjct: 235 CVDPISDEPPVIAPQGPRGFEGPAGPQ-GLRGATG 268 >UniRef50_Q0LE69 Cluster: Extracellular solute-binding protein, family 5 precursor; n=1; Herpetosiphon aurantiacus ATCC 23779|Rep: Extracellular solute-binding protein, family 5 precursor - Herpetosiphon aurantiacus ATCC 23779 Length = 590 Score = 30.7 bits (66), Expect = 6.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 163 GNSAXGASSXXKPALHIPEPLSTTNAATSS 74 G S G + +P + +P PL TTN ATS+ Sbjct: 25 GCSIEGGAPAGQPTVQVPTPLPTTNPATSN 54 >UniRef50_Q54E71 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 684 Score = 30.7 bits (66), Expect = 6.5 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXR 179 +++DNGS C+AGF D +P S+V + Sbjct: 33 IIIDNGSYQCRAGFANDISPKLIFRSLVGK 62 >UniRef50_Q9BYD9 Cluster: Actin-related protein M1; n=12; Theria|Rep: Actin-related protein M1 - Homo sapiens (Human) Length = 372 Score = 30.7 bits (66), Expect = 6.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+DNGSGM KAG P P+I+ R + Sbjct: 8 VVIDNGSGMIKAGVAGCREPQFIYPNIIGRAK 39 >UniRef50_UPI0000F2D326 Cluster: PREDICTED: similar to actin; n=1; Monodelphis domestica|Rep: PREDICTED: similar to actin - Monodelphis domestica Length = 378 Score = 30.3 bits (65), Expect = 8.6 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = +3 Query: 78 EVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR-IXA*WSXWDXRTLMYXMRHTSKX 254 ++ + + DNGSG+CK G + P +++ P+ I + + W + ++ Sbjct: 8 KIPSAIFDNGSGLCKVGISGEQNPRFIQATVLGYPQSINSMANTWQKAYYVGQEAQDNRS 67 Query: 255 VX*PQIPIEHG 287 + P++HG Sbjct: 68 ILTLNHPMQHG 78 >UniRef50_UPI0000E47BC7 Cluster: PREDICTED: similar to ubiquitin/actin fusion protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ubiquitin/actin fusion protein - Strongylocentrotus purpuratus Length = 1608 Score = 30.3 bits (65), Expect = 8.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXR 179 +++DNGS M +AG AP P++V R Sbjct: 1236 IILDNGSSMLRAGLADGVAPSVTMPTVVGR 1265 >UniRef50_UPI00005864C8 Cluster: PREDICTED: similar to Actin; n=4; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to Actin - Strongylocentrotus purpuratus Length = 383 Score = 30.3 bits (65), Expect = 8.6 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 Query: 72 DEEVAALVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 D+ +VVDNGSG +AGF A PS + R + Sbjct: 6 DDGPDPVVVDNGSGTIQAGFAGGKTCRATFPSCIGRSK 43 >UniRef50_UPI000049A548 Cluster: actin; n=1; Entamoeba histolytica HM-1:IMSS|Rep: actin - Entamoeba histolytica HM-1:IMSS Length = 365 Score = 30.3 bits (65), Expect = 8.6 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIV 173 +++DNGSG+ KAG ++ P P +V Sbjct: 6 IIIDNGSGLIKAGESSEELPKIVFPCVV 33 >UniRef50_Q7QA11 Cluster: ENSANGP00000003921; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000003921 - Anopheles gambiae str. PEST Length = 390 Score = 30.3 bits (65), Expect = 8.6 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 90 LVVDNGSGMCKAGFXXDDAPXAEXPSIVXRPR 185 +V+DNGS C+AG+ + P +I+ +PR Sbjct: 5 IVIDNGSFNCRAGWMLKEKPALVFRNILAKPR 36 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 208,377,104 Number of Sequences: 1657284 Number of extensions: 2725311 Number of successful extensions: 5846 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 5277 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5845 length of database: 575,637,011 effective HSP length: 73 effective length of database: 454,655,279 effective search space used: 10002416138 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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