SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0907.Seq
         (419 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    63   3e-09
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    42   0.007
UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma j...    34   1.3  
UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1; ...    33   2.4  
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    32   4.1  
UniRef50_A7EC45 Cluster: Predicted protein; n=1; Sclerotinia scl...    32   5.4  
UniRef50_A6SPD1 Cluster: Putative uncharacterized protein; n=2; ...    32   5.4  
UniRef50_Q17IW1 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_A2F4J8 Cluster: PIKK family atypical protein kinase; n=...    31   9.5  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 62.9 bits (146), Expect = 3e-09
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 8   GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPI 157
           G+TANGS+ Q WFLRS+  TWITV ILELIHA+         AFIR + I
Sbjct: 5   GETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 41.5 bits (93), Expect = 0.007
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 64  YLDNCGNSRANTCNQNSDQ*WDECFY*IKTN 156
           YLDNCGNSRANTC +      D C Y  KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497


>UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07011 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 101

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 67  LDNCGNSRANTCNQNSDQ*WDECFY*IKTNRRRASRPKSLILMNLDNFC 213
           +DNC NSRANTC ++  +     F   +TNR +       +  ++D  C
Sbjct: 1   MDNCSNSRANTCLESLTRKGTGAFIRTETNRVQRLMTSVPVTSSVDELC 49


>UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
           protein - Roseovarius sp. HTCC2601
          Length = 507

 Score = 33.1 bits (72), Expect = 2.4
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 56  YSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDGGPRV 175
           YS T + VV+ EL+    T+ SD  +A I + P+DG  R+
Sbjct: 139 YSATSMAVVLSELVVDDETIPSDNAAAQISAGPVDGETRI 178


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 256 ALSTFDGSFCDYHG 297
           ALSTFDG+FC YHG
Sbjct: 3   ALSTFDGTFCAYHG 16


>UniRef50_A7EC45 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 941

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 298 NHGSRRNYHRKLIRQHLKDASPVLDHAICKSYPDSSKLTTSDARPSVD 155
           NH SR+  H    + HLK+ S   D+      P  S+LTT +++P  D
Sbjct: 4   NHHSRKRKHAHRHKNHLKEKSKHPDYIHTGHIPGKSRLTT-ESKPKPD 50


>UniRef50_A6SPD1 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 669

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 175 PKSLILMNLDNFCRSHGQVPATHLSNVALSTFDGSFCDY--HGCTGN 309
           P+++ L  +D+      +V  T+L N  L   DGS+C Y  +G TG+
Sbjct: 324 PQTVTLYQVDDQIYEPEEVATTNLFNTFLDALDGSYCSYSAYGETGD 370


>UniRef50_Q17IW1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1361

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = -2

Query: 298 NHGSRRNYHRKLIRQHLKDASPVLDHAICKSYPDSSKLTTSDARPSVDWF*SNKSTHPIT 119
           N      +H  L++Q  ++  PV      K+ PD++++  +  +P+  W   + S    T
Sbjct: 41  NDAQPEQHHSPLVQQE-REQQPVELGGTGKAPPDTAQIVENGKQPTKGWESESGSDDGGT 99

Query: 118 GQSSD 104
           GQSSD
Sbjct: 100 GQSSD 104


>UniRef50_A2F4J8 Cluster: PIKK family atypical protein kinase; n=1;
            Trichomonas vaginalis G3|Rep: PIKK family atypical
            protein kinase - Trichomonas vaginalis G3
          Length = 2165

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -2

Query: 274  HRKLIRQHLKDASPVLDHAICKSYPDSSKLTTSDARPSVDWF*SNKS 134
            HRKL   +L  A P   H++   Y +++++  +DAR  + W  SN +
Sbjct: 1500 HRKLAA-YLSQAHPEEMHSVADLYKEATEICANDARGWIGWAYSNNA 1545


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,718,190
Number of Sequences: 1657284
Number of extensions: 6709476
Number of successful extensions: 15013
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15013
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -