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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0907.Seq
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   2.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   4.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   4.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   4.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   4.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   4.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   4.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   4.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   4.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           20   8.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 259 RQHLKDASPVLDHAICKSYPDSSKLTTSDARP 164
           R+H+K A PV+  + C     S++L      P
Sbjct: 67  RRHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 36  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 66


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +1

Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
           ++ +THL +    T   + C Y   T + G+
Sbjct: 80  RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +2

Query: 41   WFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDG 163
            WF  +   T IT     ++H ++  T+  M     +   DG
Sbjct: 1146 WFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDG 1186


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +1

Query: 238 THLSNVALSTFDGSFCDYHGCTGNXGI 318
           THL +    T   + C Y   T + G+
Sbjct: 84  THLQSPNTQTHPSASCKYADSTSSTGV 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,541
Number of Sequences: 336
Number of extensions: 1650
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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