Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0907.Seq
(419 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 2.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 4.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 4.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 4.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 4.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 4.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 4.9
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 4.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 4.9
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 20 8.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 20 8.5
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.2 bits (45), Expect = 2.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 259 RQHLKDASPVLDHAICKSYPDSSKLTTSDARP 164
R+H+K A PV+ + C S++L P
Sbjct: 67 RRHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 36 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 66
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.9
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +1
Query: 226 QVPATHLSNVALSTFDGSFCDYHGCTGNXGI 318
++ +THL + T + C Y T + G+
Sbjct: 80 RLASTHLQSPNTQTHPSASCKYADSTSSTGV 110
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.2 bits (40), Expect = 8.5
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = +2
Query: 41 WFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDG 163
WF + T IT ++H ++ T+ M + DG
Sbjct: 1146 WFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDG 1186
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.2 bits (40), Expect = 8.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +1
Query: 238 THLSNVALSTFDGSFCDYHGCTGNXGI 318
THL + T + C Y T + G+
Sbjct: 84 THLQSPNTQTHPSASCKYADSTSSTGV 110
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,541
Number of Sequences: 336
Number of extensions: 1650
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9279512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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