BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0906.Seq (429 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 25 0.86 AJ302657-1|CAC35522.1| 115|Anopheles gambiae gSG6 protein protein. 23 6.1 AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 6.1 AY578804-1|AAT07309.1| 133|Anopheles gambiae maverick protein. 22 8.0 AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 22 8.0 >EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium channel beta subunitprotein. Length = 466 Score = 25.4 bits (53), Expect = 0.86 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +1 Query: 52 SHPQPIRRAPTVPAAPIPPQ-ARPGQAQP 135 +HP P+R P+VP P+P Q A P QP Sbjct: 424 THP-PVRPTPSVP-RPLPSQEASPSGEQP 450 >AJ302657-1|CAC35522.1| 115|Anopheles gambiae gSG6 protein protein. Length = 115 Score = 22.6 bits (46), Expect = 6.1 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = +2 Query: 200 CFQESSFRREQTFTQAWSRKICLCFENIFDIPY 298 C + ++F+ E+ T +R C C E +PY Sbjct: 45 CTRVATFKGERFCTLCDTRHFCECKETREPLPY 77 >AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase protein. Length = 1222 Score = 22.6 bits (46), Expect = 6.1 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 101 FHLKHVRGKHNHFRQFFYLGRF 166 FHL V H +FR++ ++ F Sbjct: 923 FHLSQVLTGHGYFREYLHVCGF 944 >AY578804-1|AAT07309.1| 133|Anopheles gambiae maverick protein. Length = 133 Score = 22.2 bits (45), Expect = 8.0 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +1 Query: 268 LLRKHIRYSLPSP 306 LL +HI+Y +P P Sbjct: 82 LLHEHIKYDVPKP 94 >AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate anion exchanger protein. Length = 1102 Score = 22.2 bits (45), Expect = 8.0 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 196 LVFPGVIIQA*TDFYTSLVKKNMPLLRKHIRYSLP 300 L FP V+ Q +DF ++ +M LL R + P Sbjct: 749 LFFPAVVRQFISDFSVTIAIFSMTLLDVFTRIATP 783 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 389,531 Number of Sequences: 2352 Number of extensions: 8308 Number of successful extensions: 12 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 563,979 effective HSP length: 59 effective length of database: 425,211 effective search space used: 35292513 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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