Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0903.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13645-1|BAA02808.1| 508|Homo sapiens KIAA0020 protein. 58 2e-08
CR456957-1|CAG33238.1| 508|Homo sapiens KIAA0020 protein. 58 2e-08
BC016137-1|AAH16137.2| 648|Homo sapiens KIAA0020 protein. 58 2e-08
AL589675-1|CAI12924.2| 684|Homo sapiens KIAA0020 protein. 58 2e-08
AL354723-1|CAI15123.2| 684|Homo sapiens KIAA0020 protein. 58 2e-08
AF490254-1|AAO85462.1| 508|Homo sapiens XTP5 protein. 58 2e-08
D43951-1|BAA07895.3| 1175|Homo sapiens KIAA0099 protein protein. 32 0.96
BC013398-1|AAH13398.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL445235-5|CAI22249.1| 1224|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL445235-4|CAI22248.1| 925|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL445235-3|CAI22247.1| 1189|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL445235-2|CAI22246.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL356320-6|CAH71205.1| 1224|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL356320-5|CAH71204.1| 925|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL356320-4|CAH71202.1| 1189|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AL356320-3|CAH71203.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 0.96
AK222605-1|BAD96325.1| 1188|Homo sapiens pumilio homolog 1 varia... 32 0.96
AF315592-1|AAG31807.1| 1186|Homo sapiens Pumilio 1 protein. 32 0.96
D87078-1|BAA19665.3| 1064|Homo sapiens KIAA0235 protein protein. 30 3.9
BC112048-1|AAI12049.1| 1064|Homo sapiens pumilio homolog 2 protein. 30 3.9
BC112046-1|AAI12047.1| 1064|Homo sapiens pumilio homolog 2 (Dros... 30 3.9
BC024218-1|AAH24218.2| 489|Homo sapiens PUM2 protein protein. 30 3.9
AF315591-1|AAG31806.1| 1064|Homo sapiens Pumilio 2 protein. 30 3.9
AF272350-1|AAL36981.1| 876|Homo sapiens translational repressor... 30 3.9
AC007041-1|AAY15026.1| 1064|Homo sapiens unknown protein. 30 3.9
>D13645-1|BAA02808.1| 508|Homo sapiens KIAA0020 protein.
Length = 508
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/92 (30%), Positives = 53/92 (57%)
Frame = +1
Query: 1 RKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDII 180
RK + ++ +L +++G+ K+IA HD +RVIQ +++ E+ + +EL D +
Sbjct: 7 RKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDL 66
Query: 181 VQMGQSKYAHHSVKRILKYGTDCISMRF*RSF 276
V++ ++KY+ + VK+ L YG+ RSF
Sbjct: 67 VELSKAKYSRNIVKKFLMYGSKPQIAEIIRSF 98
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 EVLKKFYGHIVSLSTHAIKCTCLDYAYGEFASKXEKCTCTXILWRD---LXESKDAR*ST 428
E+++ F GH+ + HA ++YAY + A ++ T L+ + L +S D R +
Sbjct: 93 EIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHR-TL 151
Query: 429 QRCIQSSPE 455
+ ++ PE
Sbjct: 152 DKVLEVQPE 160
>CR456957-1|CAG33238.1| 508|Homo sapiens KIAA0020 protein.
Length = 508
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/92 (30%), Positives = 53/92 (57%)
Frame = +1
Query: 1 RKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDII 180
RK + ++ +L +++G+ K+IA HD +RVIQ +++ E+ + +EL D +
Sbjct: 7 RKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDL 66
Query: 181 VQMGQSKYAHHSVKRILKYGTDCISMRF*RSF 276
V++ ++KY+ + VK+ L YG+ RSF
Sbjct: 67 VELSKAKYSRNIVKKFLMYGSKPQIAEIIRSF 98
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 EVLKKFYGHIVSLSTHAIKCTCLDYAYGEFASKXEKCTCTXILWRD---LXESKDAR*ST 428
E+++ F GH+ + HA ++YAY + A ++ T L+ + L +S D R +
Sbjct: 93 EIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHR-TL 151
Query: 429 QRCIQSSPE 455
+ ++ PE
Sbjct: 152 DKVLEVQPE 160
>BC016137-1|AAH16137.2| 648|Homo sapiens KIAA0020 protein.
Length = 648
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/92 (30%), Positives = 53/92 (57%)
Frame = +1
Query: 1 RKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDII 180
RK + ++ +L +++G+ K+IA HD +RVIQ +++ E+ + +EL D +
Sbjct: 147 RKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDL 206
Query: 181 VQMGQSKYAHHSVKRILKYGTDCISMRF*RSF 276
V++ ++KY+ + VK+ L YG+ RSF
Sbjct: 207 VELSKAKYSRNIVKKFLMYGSKPQIAEIIRSF 238
>AL589675-1|CAI12924.2| 684|Homo sapiens KIAA0020 protein.
Length = 684
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/92 (30%), Positives = 53/92 (57%)
Frame = +1
Query: 1 RKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDII 180
RK + ++ +L +++G+ K+IA HD +RVIQ +++ E+ + +EL D +
Sbjct: 183 RKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDL 242
Query: 181 VQMGQSKYAHHSVKRILKYGTDCISMRF*RSF 276
V++ ++KY+ + VK+ L YG+ RSF
Sbjct: 243 VELSKAKYSRNIVKKFLMYGSKPQIAEIIRSF 274
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 EVLKKFYGHIVSLSTHAIKCTCLDYAYGEFASKXEKCTCTXILWRD---LXESKDAR*ST 428
E+++ F GH+ + HA ++YAY + A ++ T L+ + L +S D R +
Sbjct: 269 EIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHR-TL 327
Query: 429 QRCIQSSPE 455
+ ++ PE
Sbjct: 328 DKVLEVQPE 336
>AL354723-1|CAI15123.2| 684|Homo sapiens KIAA0020 protein.
Length = 684
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/92 (30%), Positives = 53/92 (57%)
Frame = +1
Query: 1 RKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDII 180
RK + ++ +L +++G+ K+IA HD +RVIQ +++ E+ + +EL D +
Sbjct: 183 RKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDL 242
Query: 181 VQMGQSKYAHHSVKRILKYGTDCISMRF*RSF 276
V++ ++KY+ + VK+ L YG+ RSF
Sbjct: 243 VELSKAKYSRNIVKKFLMYGSKPQIAEIIRSF 274
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 EVLKKFYGHIVSLSTHAIKCTCLDYAYGEFASKXEKCTCTXILWRD---LXESKDAR*ST 428
E+++ F GH+ + HA ++YAY + A ++ T L+ + L +S D R +
Sbjct: 269 EIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHR-TL 327
Query: 429 QRCIQSSPE 455
+ ++ PE
Sbjct: 328 DKVLEVQPE 336
>AF490254-1|AAO85462.1| 508|Homo sapiens XTP5 protein.
Length = 508
Score = 57.6 bits (133), Expect = 2e-08
Identities = 28/92 (30%), Positives = 53/92 (57%)
Frame = +1
Query: 1 RKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDII 180
RK + ++ +L +++G+ K+IA HD +RVIQ +++ E+ + +EL D +
Sbjct: 7 RKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDL 66
Query: 181 VQMGQSKYAHHSVKRILKYGTDCISMRF*RSF 276
V++ ++KY+ + VK+ L YG+ RSF
Sbjct: 67 VELSKAKYSRNIVKKFLMYGSKPQIAEIIRSF 98
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 258 EVLKKFYGHIVSLSTHAIKCTCLDYAYGEFASKXEKCTCTXILWRD---LXESKDAR*ST 428
E+++ F GH+ + HA ++YAY + A ++ T L+ + L +S D R +
Sbjct: 93 EIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHR-TL 151
Query: 429 QRCIQSSPE 455
+ ++ PE
Sbjct: 152 DKVLEVQPE 160
>D43951-1|BAA07895.3| 1175|Homo sapiens KIAA0099 protein protein.
Length = 1175
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 888 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 947
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 948 GHVLKCVKDQNGNHVVQKCIE 968
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 983 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1041
Query: 238 G 240
G
Sbjct: 1042 G 1042
>BC013398-1|AAH13398.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 32.3 bits (70), Expect = 0.96
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDI 177
V++ F+ S ++ L ++G S+AL RVIQ L+ P D NE+ +EL
Sbjct: 901 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGH 960
Query: 178 IVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 961 VLKCVKDQNGNHVVQKCIE 979
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 994 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 238 G 240
G
Sbjct: 1053 G 1053
>AL445235-5|CAI22249.1| 1224|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1224
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 937 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 996
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 997 GHVLKCVKDQNGNHVVQKCIE 1017
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 1032 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1090
Query: 238 G 240
G
Sbjct: 1091 G 1091
>AL445235-4|CAI22248.1| 925|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 638 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 697
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 698 GHVLKCVKDQNGNHVVQKCIE 718
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 733 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 791
Query: 238 G 240
G
Sbjct: 792 G 792
>AL445235-3|CAI22247.1| 1189|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1189
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 902 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 961
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 962 GHVLKCVKDQNGNHVVQKCIE 982
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 997 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1055
Query: 238 G 240
G
Sbjct: 1056 G 1056
>AL445235-2|CAI22246.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 32.3 bits (70), Expect = 0.96
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDI 177
V++ F+ S ++ L ++G S+AL RVIQ L+ P D NE+ +EL
Sbjct: 901 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGH 960
Query: 178 IVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 961 VLKCVKDQNGNHVVQKCIE 979
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 994 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 238 G 240
G
Sbjct: 1053 G 1053
>AL356320-6|CAH71205.1| 1224|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1224
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 937 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 996
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 997 GHVLKCVKDQNGNHVVQKCIE 1017
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 1032 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1090
Query: 238 G 240
G
Sbjct: 1091 G 1091
>AL356320-5|CAH71204.1| 925|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 638 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 697
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 698 GHVLKCVKDQNGNHVVQKCIE 718
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 733 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 791
Query: 238 G 240
G
Sbjct: 792 G 792
>AL356320-4|CAH71202.1| 1189|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1189
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 902 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 961
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 962 GHVLKCVKDQNGNHVVQKCIE 982
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 997 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1055
Query: 238 G 240
G
Sbjct: 1056 G 1056
>AL356320-3|CAH71203.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 32.3 bits (70), Expect = 0.96
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDI 177
V++ F+ S ++ L ++G S+AL RVIQ L+ P D NE+ +EL
Sbjct: 901 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGH 960
Query: 178 IVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 961 VLKCVKDQNGNHVVQKCIE 979
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 994 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 238 G 240
G
Sbjct: 1053 G 1053
>AK222605-1|BAD96325.1| 1188|Homo sapiens pumilio homolog 1 variant
protein.
Length = 1188
Score = 32.3 bits (70), Expect = 0.96
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPED--IINEITKELL 171
V++ F+ S ++ L ++G S+AL RVIQ L+ P D +INE+ +EL
Sbjct: 901 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELD 960
Query: 172 DIIVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 961 GHVLKCVKDQNGNHVVQKCIE 981
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 996 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1054
Query: 238 G 240
G
Sbjct: 1055 G 1055
>AF315592-1|AAG31807.1| 1186|Homo sapiens Pumilio 1 protein.
Length = 1186
Score = 32.3 bits (70), Expect = 0.96
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 7 VVKSDFKINSCKE---LHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDI 177
V++ F+ S ++ L ++G S+AL RVIQ L+ P D NE+ +EL
Sbjct: 901 VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGH 960
Query: 178 IVQMGQSKYAHHSVKRILK 234
+++ + + +H V++ ++
Sbjct: 961 VLKCVKDQNGNHVVQKCIE 979
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ +++ TH RVIQ +L+H D I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 994 KGQVFALS-THPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 238 G 240
G
Sbjct: 1053 G 1053
>D87078-1|BAA19665.3| 1064|Homo sapiens KIAA0235 protein protein.
Length = 1064
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 872 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 238 G 240
G
Sbjct: 931 G 931
>BC112048-1|AAI12049.1| 1064|Homo sapiens pumilio homolog 2 protein.
Length = 1064
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 872 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 238 G 240
G
Sbjct: 931 G 931
>BC112046-1|AAI12047.1| 1064|Homo sapiens pumilio homolog 2
(Drosophila) protein.
Length = 1064
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 872 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 238 G 240
G
Sbjct: 931 G 931
>BC024218-1|AAH24218.2| 489|Homo sapiens PUM2 protein protein.
Length = 489
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 297 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 355
Query: 238 G 240
G
Sbjct: 356 G 356
>AF315591-1|AAG31806.1| 1064|Homo sapiens Pumilio 2 protein.
Length = 1064
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 872 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 238 G 240
G
Sbjct: 931 G 931
>AF272350-1|AAL36981.1| 876|Homo sapiens translational repressor
pumilio protein.
Length = 876
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 684 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 742
Query: 238 G 240
G
Sbjct: 743 G 743
>AC007041-1|AAY15026.1| 1064|Homo sapiens unknown protein.
Length = 1064
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 KGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKY 237
KGQ ++ TH RVIQ +L+H + I +EL Q+ Q +Y ++ ++ +L++
Sbjct: 872 KGQVFVLS-THPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 238 G 240
G
Sbjct: 931 G 931
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,497,042
Number of Sequences: 237096
Number of extensions: 1182536
Number of successful extensions: 2509
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2509
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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