Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0903.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132165-1|AAD34753.1| 737|Drosophila melanogaster unknown prot... 58 7e-09
AF017777-4|AAC28403.1| 737|Drosophila melanogaster penguin prot... 58 7e-09
AE014298-3120|AAF50828.1| 737|Drosophila melanogaster CG1685-PA... 58 7e-09
X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein. 36 0.030
L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protei... 36 0.030
BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p pro... 36 0.030
BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p pro... 36 0.030
AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,... 36 0.030
AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,... 36 0.030
AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,... 36 0.030
AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,... 36 0.030
AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,... 36 0.030
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P... 28 6.1
M96444-1|AAF02178.1| 128|Drosophila melanogaster fork head doma... 28 8.1
BT028866-1|ABI34247.2| 271|Drosophila melanogaster RT01157p pro... 28 8.1
AY069449-1|AAL39594.1| 433|Drosophila melanogaster LD16340p pro... 28 8.1
AY051683-1|AAK93107.1| 394|Drosophila melanogaster LD23405p pro... 28 8.1
AE014297-3715|AAF56397.1| 271|Drosophila melanogaster CG11922-P... 28 8.1
AE014297-2636|AAF55643.2| 426|Drosophila melanogaster CG5558-PB... 28 8.1
AE014297-2635|AAF55642.1| 433|Drosophila melanogaster CG5558-PA... 28 8.1
AE014134-2155|AAF53162.1| 394|Drosophila melanogaster CG6712-PA... 28 8.1
>AF132165-1|AAD34753.1| 737|Drosophila melanogaster unknown
protein.
Length = 737
Score = 58.0 bits (134), Expect = 7e-09
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +1
Query: 79 IALTHDLSRVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKYGTDCISM 258
+ HD +RVIQ +LK++ + EI+++LL V+M QSKYA V+R+LKYG
Sbjct: 175 VVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKA 234
Query: 259 RF*RS-FMDILYPCQLMLLSAPAWIMHMGSLPRKXKNAHAXEFYGEIYXNQKMQG-EALR 432
+ S + I+ + S M+ + P + + EFYG++Y K + L
Sbjct: 235 KLVDSLYGHIVRLAGHSIGSGLLDSMYQSATPNQ-RIYMRQEFYGDLYRKAKDSNVKTLS 293
Query: 433 DAYK 444
D YK
Sbjct: 294 DTYK 297
>AF017777-4|AAC28403.1| 737|Drosophila melanogaster penguin
protein.
Length = 737
Score = 58.0 bits (134), Expect = 7e-09
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +1
Query: 79 IALTHDLSRVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKYGTDCISM 258
+ HD +RVIQ +LK++ + EI+++LL V+M QSKYA V+R+LKYG
Sbjct: 175 VVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKA 234
Query: 259 RF*RS-FMDILYPCQLMLLSAPAWIMHMGSLPRKXKNAHAXEFYGEIYXNQKMQG-EALR 432
+ S + I+ + S M+ + P + + EFYG++Y K + L
Sbjct: 235 KLVDSLYGHIVRLAGHSIGSGLLDSMYQSATPNQ-RIYMRQEFYGDLYRKAKDSNVKTLS 293
Query: 433 DAYK 444
D YK
Sbjct: 294 DTYK 297
>AE014298-3120|AAF50828.1| 737|Drosophila melanogaster CG1685-PA
protein.
Length = 737
Score = 58.0 bits (134), Expect = 7e-09
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +1
Query: 79 IALTHDLSRVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKYGTDCISM 258
+ HD +RVIQ +LK++ + EI+++LL V+M QSKYA V+R+LKYG
Sbjct: 175 VVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKA 234
Query: 259 RF*RS-FMDILYPCQLMLLSAPAWIMHMGSLPRKXKNAHAXEFYGEIYXNQKMQG-EALR 432
+ S + I+ + S M+ + P + + EFYG++Y K + L
Sbjct: 235 KLVDSLYGHIVRLAGHSIGSGLLDSMYQSATPNQ-RIYMRQEFYGDLYRKAKDSNVKTLS 293
Query: 433 DAYK 444
D YK
Sbjct: 294 DTYK 297
>X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.
Length = 1533
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 1254 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 1312
Query: 229 LKYG 240
L++G
Sbjct: 1313 LEHG 1316
>L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protein
protein.
Length = 1533
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 1254 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 1312
Query: 229 LKYG 240
L++G
Sbjct: 1313 LEHG 1316
>BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p protein.
Length = 1533
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 1254 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 1312
Query: 229 LKYG 240
L++G
Sbjct: 1313 LEHG 1316
>BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p
protein.
Length = 935
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 656 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 714
Query: 229 LKYG 240
L++G
Sbjct: 715 LEHG 718
>AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,
isoform E protein.
Length = 935
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 656 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 714
Query: 229 LKYG 240
L++G
Sbjct: 715 LEHG 718
>AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,
isoform B protein.
Length = 1185
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 906 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 964
Query: 229 LKYG 240
L++G
Sbjct: 965 LEHG 968
>AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,
isoform D protein.
Length = 1533
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 1254 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 1312
Query: 229 LKYG 240
L++G
Sbjct: 1313 LEHG 1316
>AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,
isoform C protein.
Length = 1533
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 1254 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 1312
Query: 229 LKYG 240
L++G
Sbjct: 1313 LEHG 1316
>AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,
isoform A protein.
Length = 1533
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 52 NMLKGQYKSIALTHDLS-RVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRI 228
N KGQ S++ TH RVIQ +L+H + I EL + Q+ Q +Y ++ ++ +
Sbjct: 1254 NAFKGQVYSLS-THPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHV 1312
Query: 229 LKYG 240
L++G
Sbjct: 1313 LEHG 1316
>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
protein.
Length = 1424
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 7 VVKSDFKINSCKELHNMLKGQYKS-IALTHDLSRVIQVLLKHSPEDIINEITKELLDIIV 183
++K+ F+ + + H+ L G+ I + H+L +Q+ ++ EI +LD ++
Sbjct: 220 ILKACFEF-TLQRRHSFLPGEASFLIDMLHELDTYLQLKGTQLEREMAAEIILRILDKVM 278
Query: 184 QMGQSKYAHHSVKRI 228
Q QS + +K++
Sbjct: 279 QNAQSLNSQQQIKKL 293
>M96444-1|AAF02178.1| 128|Drosophila melanogaster fork head domain
DNA binding proteinprotein.
Length = 128
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 489 KWPTGLRYRISFLDCFV 439
KW LR+ +SF DCF+
Sbjct: 59 KWQNSLRHNLSFNDCFI 75
>BT028866-1|ABI34247.2| 271|Drosophila melanogaster RT01157p
protein.
Length = 271
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 489 KWPTGLRYRISFLDCFV 439
KW LR+ +SF DCF+
Sbjct: 56 KWQNSLRHNLSFNDCFI 72
>AY069449-1|AAL39594.1| 433|Drosophila melanogaster LD16340p
protein.
Length = 433
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 324 LDYAYGEFASKXEKCTCTXILWRDLXESKDAR*STQRCIQSSPEMK 461
L +A G F + CT LW++ E QRC+Q +P K
Sbjct: 339 LSHAMGAFPNVKRIAYCTCSLWKEENEQ-----VVQRCLQLNPSFK 379
>AY051683-1|AAK93107.1| 394|Drosophila melanogaster LD23405p
protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 76 SIALTHDLSRVIQVLLKHSPEDIINEITKEL 168
++ LT D+ R + + KH PE I+N T L
Sbjct: 268 NVKLTSDIKRDHKEITKHRPEVILNNFTTRL 298
>AE014297-3715|AAF56397.1| 271|Drosophila melanogaster CG11922-PA
protein.
Length = 271
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 489 KWPTGLRYRISFLDCFV 439
KW LR+ +SF DCF+
Sbjct: 56 KWQNSLRHNLSFNDCFI 72
>AE014297-2636|AAF55643.2| 426|Drosophila melanogaster CG5558-PB,
isoform B protein.
Length = 426
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 324 LDYAYGEFASKXEKCTCTXILWRDLXESKDAR*STQRCIQSSPEMK 461
L +A G F + CT LW++ E QRC+Q +P K
Sbjct: 332 LSHAMGAFPNVKRIAYCTCSLWKEENEQ-----VVQRCLQLNPSFK 372
>AE014297-2635|AAF55642.1| 433|Drosophila melanogaster CG5558-PA,
isoform A protein.
Length = 433
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 324 LDYAYGEFASKXEKCTCTXILWRDLXESKDAR*STQRCIQSSPEMK 461
L +A G F + CT LW++ E QRC+Q +P K
Sbjct: 339 LSHAMGAFPNVKRIAYCTCSLWKEENEQ-----VVQRCLQLNPSFK 379
>AE014134-2155|AAF53162.1| 394|Drosophila melanogaster CG6712-PA
protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 76 SIALTHDLSRVIQVLLKHSPEDIINEITKEL 168
++ LT D+ R + + KH PE I+N T L
Sbjct: 268 NVKLTSDIKRDHKEITKHRPEVILNNFTTRL 298
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,119,259
Number of Sequences: 53049
Number of extensions: 376163
Number of successful extensions: 979
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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