Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0900.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA...    31   0.94 
AY089381-1|AAL90119.1|  149|Drosophila melanogaster AT20622p pro...    28   5.0  
AE013599-404|AAF59261.2|  149|Drosophila melanogaster CG11145-PA...    28   5.0  

>AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA
           protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 108 VPAHGARPITKH*IITYINSERNPHLHGHQYKTTDTYL 221
           VP H   P T H  ++Y +   +PH H H ++  D+Y+
Sbjct: 323 VPPHH-HPYTVHHPVSYAHPHGHPHAHPHPHEHFDSYI 359


>AY089381-1|AAL90119.1|  149|Drosophila melanogaster AT20622p
           protein.
          Length = 149

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 319 QSSTIPILLSFVFSTVRVFGSNLPIRRDMLCVSKYVSVVLY*CPCRWGLRS 167
           Q    P LL F++S V +F   +P+   +L +  Y  +  Y     +GL++
Sbjct: 41  QPLPFPTLLKFIYSWVLIFFIMIPMLYPLLVLLSYYGIFQYAAEEHFGLKT 91


>AE013599-404|AAF59261.2|  149|Drosophila melanogaster CG11145-PA
           protein.
          Length = 149

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 319 QSSTIPILLSFVFSTVRVFGSNLPIRRDMLCVSKYVSVVLY*CPCRWGLRS 167
           Q    P LL F++S V +F   +P+   +L +  Y  +  Y     +GL++
Sbjct: 41  QPLPFPTLLKFIYSWVLIFFIMIPMLYPLLVLLSYYGIFQYAAEEHFGLKT 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,511,332
Number of Sequences: 53049
Number of extensions: 408533
Number of successful extensions: 1018
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)