Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0899.Seq
(259 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PZX9 Cluster: ENSANGP00000014054; n=2; Culicidae|Rep:... 134 4e-31
UniRef50_P46778 Cluster: 60S ribosomal protein L21; n=329; Fungi... 128 3e-29
UniRef50_Q4KTG5 Cluster: L21; n=2; Metazoa|Rep: L21 - Suberites ... 116 8e-26
UniRef50_Q02753 Cluster: 60S ribosomal protein L21-A; n=31; Euka... 113 6e-25
UniRef50_Q43291 Cluster: 60S ribosomal protein L21-1; n=24; Euka... 101 4e-21
UniRef50_Q7XYA8 Cluster: 60S ribosome protein L21; n=1; Griffith... 91 3e-18
UniRef50_P38653 Cluster: 60S ribosomal protein L21; n=2; Entamoe... 90 8e-18
UniRef50_A2F2S5 Cluster: Ribosomal protein L21e, putative; n=6; ... 89 2e-17
UniRef50_Q1KYN7 Cluster: RPL21; n=1; Streblomastix strix|Rep: RP... 88 4e-17
UniRef50_Q5CX53 Cluster: 60s ribosomal protein L21; n=3; Cryptos... 87 1e-16
UniRef50_Q4QEX4 Cluster: 60S ribosomal protein l21, putative; n=... 86 1e-16
UniRef50_Q7R5F3 Cluster: GLP_165_41283_41762; n=3; Eukaryota|Rep... 85 2e-16
UniRef50_Q7REC3 Cluster: Ribosomal protein L21e, putative; n=5; ... 85 4e-16
UniRef50_Q8SRW8 Cluster: 60S ribosomal protein L21; n=1; Encepha... 85 4e-16
UniRef50_UPI0001553B37 Cluster: PREDICTED: similar to ribosomal ... 83 2e-15
UniRef50_Q23TC8 Cluster: 60S ribosomal protein L21, putative; n=... 78 3e-14
UniRef50_UPI0000DD8153 Cluster: PREDICTED: similar to ribosomal ... 74 6e-13
UniRef50_A3E3H5 Cluster: 60S ribosomal protein I21; n=3; Alveola... 72 3e-12
UniRef50_UPI0000E24650 Cluster: PREDICTED: similar to Ribosomal ... 69 2e-11
UniRef50_A6RC90 Cluster: 60s ribosomal protein l21; n=1; Ajellom... 63 1e-09
UniRef50_UPI0000D9A1A6 Cluster: PREDICTED: similar to 60S riboso... 59 2e-08
UniRef50_Q9AW28 Cluster: 60S ribosomal protein L21; n=1; Guillar... 54 8e-07
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 43 0.002
UniRef50_Q4JB11 Cluster: 50S ribosomal protein L21e; n=8; Archae... 40 0.011
UniRef50_A4D227 Cluster: Similar to 60S RIBOSOMAL PROTEIN L21; n... 39 0.025
UniRef50_Q9UXE0 Cluster: 50S ribosomal protein L21e; n=6; Thermo... 37 0.10
UniRef50_Q42194 Cluster: 60S ribosomal protein L21; n=10; Magnol... 36 0.24
UniRef50_UPI0000DA1EED Cluster: PREDICTED: similar to 60S riboso... 34 0.55
UniRef50_Q6L228 Cluster: 50S ribosomal protein L21e; n=2; Thermo... 34 0.55
UniRef50_Q5MGB3 Cluster: Transposase; n=1; Phytophthora infestan... 33 0.95
UniRef50_A0RUT3 Cluster: Ribosomal protein L21E; n=2; Thermoprot... 33 1.3
UniRef50_O28743 Cluster: 50S ribosomal protein L21e; n=5; Euryar... 33 1.7
UniRef50_Q8UCM9 Cluster: Iron-chelator utilization protein; n=1;... 32 2.9
UniRef50_A0DWE5 Cluster: Chromosome undetermined scaffold_67, wh... 32 2.9
UniRef50_O74001 Cluster: 50S ribosomal protein L21e; n=15; Archa... 32 2.9
UniRef50_A2TTQ4 Cluster: Sensor protein; n=9; Bacteroidetes|Rep:... 31 5.1
UniRef50_Q8E9X7 Cluster: ISSod7, transposase; n=27; Gammaproteob... 31 6.7
>UniRef50_Q7PZX9 Cluster: ENSANGP00000014054; n=2; Culicidae|Rep:
ENSANGP00000014054 - Anopheles gambiae str. PEST
Length = 162
Score = 134 bits (324), Expect = 4e-31
Identities = 61/86 (70%), Positives = 70/86 (81%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HGTIP STYMK+ K GD I G+GAV KGMP+K YHGKTGRVYNV+ HALGVIVNKRVR
Sbjct: 22 HGTIPLSTYMKIYKSGDYVDIKGHGAVHKGMPYKAYHGKTGRVYNVSKHALGVIVNKRVR 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
G+I P RI +RVEHV+ + R+DFLR
Sbjct: 82 GKILPKRINVRVEHVQPSRCREDFLR 107
>UniRef50_P46778 Cluster: 60S ribosomal protein L21; n=329;
Fungi/Metazoa group|Rep: 60S ribosomal protein L21 -
Homo sapiens (Human)
Length = 160
Score = 128 bits (308), Expect = 3e-29
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG +P +TYM++ K GDI I G G VQKGMPHK YHGKTGRVYNVT HA+G++VNK+V+
Sbjct: 22 HGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVK 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
G+I RI +R+EH+KH K R FL+
Sbjct: 82 GKILAKRINVRIEHIKHSKSRDSFLK 107
>UniRef50_Q4KTG5 Cluster: L21; n=2; Metazoa|Rep: L21 - Suberites
domuncula (Sponge)
Length = 160
Score = 116 bits (280), Expect = 8e-26
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
+G STYMKV KVGDI + GNGA KGMP+K YHGKTG+VYNVT A+GVIVNK +R
Sbjct: 22 NGVQHLSTYMKVYKVGDIVDVKGNGAFHKGMPYKFYHGKTGKVYNVTKRAVGVIVNKPLR 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFL 255
+I RI +R+EHVKH + R+DFL
Sbjct: 82 NKILQKRINVRIEHVKHSRCREDFL 106
>UniRef50_Q02753 Cluster: 60S ribosomal protein L21-A; n=31;
Eukaryota|Rep: 60S ribosomal protein L21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 160
Score = 113 bits (273), Expect = 6e-25
Identities = 51/85 (60%), Positives = 62/85 (72%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG + STY+KV KVGDI I NG++QKGMPHK Y GKTG VYNVT ++GVI+NK V
Sbjct: 22 HGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVG 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFL 255
R R+ +RVEH+KH K RQ+FL
Sbjct: 82 NRYLEKRLNLRVEHIKHSKCRQEFL 106
>UniRef50_Q43291 Cluster: 60S ribosomal protein L21-1; n=24;
Eukaryota|Rep: 60S ribosomal protein L21-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 164
Score = 101 bits (241), Expect = 4e-21
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 183
G IP STY++ KVGD + NGA+ KGMPHK YHG+TGR++NVT A+GV VNK++
Sbjct: 23 GYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGN 82
Query: 184 RIXPXRIXIRVEHVKHXKXRQDF 252
RI RI +RVEHV+ + ++F
Sbjct: 83 RIIRKRIHVRVEHVQQSRCAEEF 105
>UniRef50_Q7XYA8 Cluster: 60S ribosome protein L21; n=1; Griffithsia
japonica|Rep: 60S ribosome protein L21 - Griffithsia
japonica (Red alga)
Length = 159
Score = 91.5 bits (217), Expect = 3e-18
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +1
Query: 19 STYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIXPX 198
STY++V K+G+ I N + KGMPHK YHG+TGRV+NV+ A+GV V+KRVR RI
Sbjct: 28 STYLQVFKIGEYVDIHINPTIMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKRVRHRIINK 87
Query: 199 RIXIRVEHVKHXKXRQDFL 255
R IR+EHV+ + +DFL
Sbjct: 88 RFHIRIEHVRKSQCNKDFL 106
>UniRef50_P38653 Cluster: 60S ribosomal protein L21; n=2; Entamoeba
histolytica|Rep: 60S ribosomal protein L21 - Entamoeba
histolytica
Length = 166
Score = 90.2 bits (214), Expect = 8e-18
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG ST + KVGD I+ N ++Q G+P+K +HGKTGRV+NV HA+GV+VNK+V
Sbjct: 22 HGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVN 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFL 255
RI R+ I EH++ ++DFL
Sbjct: 82 NRIVVKRLHISPEHIRPSGCQKDFL 106
>UniRef50_A2F2S5 Cluster: Ribosomal protein L21e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L21e,
putative - Trichomonas vaginalis G3
Length = 159
Score = 88.6 bits (210), Expect = 2e-17
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG S ++ ++GDI I NGA+ GMP++VYHG TG V+NV+ HA+G++V +RV
Sbjct: 22 HGAPAPSITLRTFRIGDIVDIKVNGALHSGMPNRVYHGATGIVWNVSPHAVGILVKRRVN 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFL 255
I P RI +R EHV K + DF+
Sbjct: 82 NHIAPKRIYVRTEHVFPSKSKNDFV 106
>UniRef50_Q1KYN7 Cluster: RPL21; n=1; Streblomastix strix|Rep: RPL21
- Streblomastix strix
Length = 146
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG S Y++ +GD I + A+ KGMP + YHG+TGR++ + HA+G+ VNKR
Sbjct: 22 HGMPSTSRYLQKFNIGDYVDIKADSAIHKGMPFRYYHGRTGRIWALFNHAVGIEVNKRWG 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
RI R+ IR+EHV+ K RQDFL+
Sbjct: 82 NRIIQKRVYIRIEHVRKSKCRQDFLQ 107
>UniRef50_Q5CX53 Cluster: 60s ribosomal protein L21; n=3;
Cryptosporidium|Rep: 60s ribosomal protein L21 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 86.6 bits (205), Expect = 1e-16
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +1
Query: 19 STYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIXPX 198
S Y+K KVGD I+ + ++ KGMP+ YHG+TG VYNV ALGVIVNK V R
Sbjct: 28 SRYLKPIKVGDYVDIVVDSSIHKGMPYHFYHGRTGVVYNVAPRALGVIVNKVVGNRQIAK 87
Query: 199 RIXIRVEHVKHXKXRQDFLR 258
RI +R+EHV+ + +DFL+
Sbjct: 88 RINVRIEHVRLSRCNEDFLK 107
>UniRef50_Q4QEX4 Cluster: 60S ribosomal protein l21, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein l21,
putative - Leishmania major
Length = 159
Score = 86.2 bits (204), Expect = 1e-16
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG ST + KVGD ++ + AV++GMPHK YHG+TG V+NVT +GVI+NK VR
Sbjct: 22 HGVPSVSTILTNIKVGDYVDVVADSAVREGMPHKYYHGRTGIVWNVTPRGVGVIINKPVR 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDF 252
R RI +R EHV+ + ++ F
Sbjct: 82 TRTLRKRICVRFEHVRKSRCQEAF 105
>UniRef50_Q7R5F3 Cluster: GLP_165_41283_41762; n=3; Eukaryota|Rep:
GLP_165_41283_41762 - Giardia lamblia ATCC 50803
Length = 159
Score = 85.4 bits (202), Expect = 2e-16
Identities = 40/85 (47%), Positives = 54/85 (63%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG +TY +V K+G I NGA KGMPH+ Y+G+TG ++N+ ALGV + KRVR
Sbjct: 22 HGMANLTTYNRVYKLGQYVNIKVNGAYHKGMPHRYYNGRTGTIFNIGPRALGVQIQKRVR 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFL 255
GRI RI +R+EHV R++ L
Sbjct: 82 GRIMLKRINVRLEHVHPSDCRKNHL 106
>UniRef50_Q7REC3 Cluster: Ribosomal protein L21e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L21e, putative -
Plasmodium yoelii yoelii
Length = 161
Score = 84.6 bits (200), Expect = 4e-16
Identities = 34/85 (40%), Positives = 55/85 (64%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG + Y++ GD I+ + + QKGMP YHG+TG+V+++T +GV+VNKRVR
Sbjct: 23 HGECTANKYLENINYGDYVDIVCDSSQQKGMPFNFYHGRTGKVFHITKRGVGVLVNKRVR 82
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFL 255
RI ++ +R+EHV+ + +DF+
Sbjct: 83 HRIIQKKVCVRIEHVRKSRCNEDFI 107
>UniRef50_Q8SRW8 Cluster: 60S ribosomal protein L21; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L21
- Encephalitozoon cuniculi
Length = 160
Score = 84.6 bits (200), Expect = 4e-16
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG S Y++ ++GD+ I+ N A+ KGMPHK YHG+TGRVY+V +L V + KRVR
Sbjct: 21 HGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVR 80
Query: 181 GRIXPXRIXIRVEHVKHXKXRQD 249
G+ +I +R+EHV+ + ++
Sbjct: 81 GKYVIKKIIVRIEHVRKSRCSEE 103
>UniRef50_UPI0001553B37 Cluster: PREDICTED: similar to ribosomal
protein L21; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L21 - Mus musculus
Length = 159
Score = 82.6 bits (195), Expect = 2e-15
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHA 150
HG +P +TYM++ K GDI I G G VQKGMPHK YHGKTGRVYNVT HA
Sbjct: 22 HGIVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHA 71
>UniRef50_Q23TC8 Cluster: 60S ribosomal protein L21, putative; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L21,
putative - Tetrahymena thermophila SB210
Length = 180
Score = 78.2 bits (184), Expect = 3e-14
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 183
G + S Y+ KVG+ I+ +G+ KGMP+K+YHG+TG+V+NV ++GVIV++ V G
Sbjct: 46 GHVRISRYLTTYKVGEYVDIMVDGSQHKGMPYKLYHGRTGKVFNVNPRSIGVIVHRIVNG 105
Query: 184 RIXPXRIXIRVEHVK 228
R R+ +++EHV+
Sbjct: 106 RYIEKRLHVKIEHVR 120
>UniRef50_UPI0000DD8153 Cluster: PREDICTED: similar to ribosomal
protein L21; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein L21 - Homo sapiens
Length = 125
Score = 74.1 bits (174), Expect = 6e-13
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
H +P + YM++ K GDI I G G VQKGMPHK YHGK RVY V HA G++ N + +
Sbjct: 22 HEVVPLAMYMQICKKGDIIDIKGVGTVQKGMPHKCYHGKAERVYLVPQHAAGIVENDQKK 81
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
++++ + DF+R
Sbjct: 82 KEAKENGTWVQLKRQPPPPRKADFVR 107
>UniRef50_A3E3H5 Cluster: 60S ribosomal protein I21; n=3;
Alveolata|Rep: 60S ribosomal protein I21 - Pfiesteria
piscicida
Length = 165
Score = 71.7 bits (168), Expect = 3e-12
Identities = 35/80 (43%), Positives = 47/80 (58%)
Frame = +1
Query: 19 STYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIXPX 198
S YM V + GD I + +VQ GMPH YHG+TG V+NV +ALGV + K V R
Sbjct: 32 SRYMAVFRRGDYVDICVDSSVQVGMPHSFYHGRTGIVFNVNRNALGVEITKIVGNRQLRK 91
Query: 199 RIXIRVEHVKHXKXRQDFLR 258
RI + + HV+ + + FLR
Sbjct: 92 RIHVNIAHVRKSRCNEAFLR 111
>UniRef50_UPI0000E24650 Cluster: PREDICTED: similar to Ribosomal
protein L21; n=1; Pan troglodytes|Rep: PREDICTED:
similar to Ribosomal protein L21 - Pan troglodytes
Length = 234
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
HG+IP + V GDI I G GAVQKG+PHK +HGKT + A+G++ NK
Sbjct: 99 HGSIPNPKGISVVAEGDIVDIKGMGAVQKGIPHKHFHGKTQKSLQCYQQAVGIVGNK--- 155
Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
G+ ++ + +EH+KH + FL+
Sbjct: 156 GKNLVKKMNVLIEHIKHSESWNHFLK 181
>UniRef50_A6RC90 Cluster: 60s ribosomal protein l21; n=1;
Ajellomyces capsulatus NAm1|Rep: 60s ribosomal protein
l21 - Ajellomyces capsulatus NAm1
Length = 163
Score = 62.9 bits (146), Expect = 1e-09
Identities = 36/64 (56%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 HGTIPXSTYMKVXKVGDIXXIIGNGAVQKG-MPHKVYHGKTG-RVYNVTAHALGVIVNKR 174
HG IP STYM+V +VGDI I NGAVQ+G KVYHGKTG + + A GVI+ KR
Sbjct: 22 HGVIPLSTYMRVYRVGDIVDIKVNGAVQQGSYAIKVYHGKTGVCLQRDKSLAFGVIIYKR 81
Query: 175 VRGR 186
V R
Sbjct: 82 VGNR 85
>UniRef50_UPI0000D9A1A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L21; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L21 - Macaca mulatta
Length = 82
Score = 58.8 bits (136), Expect = 2e-08
Identities = 22/33 (66%), Positives = 30/33 (90%)
Frame = +1
Query: 91 MPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRI 189
MPHK YH KTGRVYN+T +A+G++VNK+V+G+I
Sbjct: 1 MPHKCYHSKTGRVYNITQNAVGIVVNKQVKGKI 33
>UniRef50_Q9AW28 Cluster: 60S ribosomal protein L21; n=1; Guillardia
theta|Rep: 60S ribosomal protein L21 - Guillardia theta
(Cryptomonas phi)
Length = 156
Score = 53.6 bits (123), Expect = 8e-07
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +1
Query: 43 VGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIXPXRIXIRVEH 222
+GD+ I+ + + Q MP K YHGKTG V+++ +++LG+ + K V R +I I +EH
Sbjct: 35 IGDLVDIVIDPSFQSTMPFKFYHGKTGEVFSLNSNSLGIKIQKIVGNRKVCKKINIGLEH 94
Query: 223 VKHXK 237
++ K
Sbjct: 95 LRISK 99
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 183
G P S ++ + G+ I + +V KGMPH+ +HG TG+V A V ++ R
Sbjct: 43 GLSPISKAIQQFEPGESVHIRIDPSVHKGMPHQRFHGMTGKVIGERGRAFIVEISDGKRK 102
Query: 184 RIXPXRIXIRVEHV 225
R + IR EH+
Sbjct: 103 RKKVKELFIRAEHL 116
>UniRef50_Q4JB11 Cluster: 50S ribosomal protein L21e; n=8;
Archaea|Rep: 50S ribosomal protein L21e - Sulfolobus
acidocaldarius
Length = 103
Score = 39.9 bits (89), Expect = 0.011
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 4 GTIPX-STYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
G IP S M G+ + N ++ KGMPH+ YHGK G V A V VN +
Sbjct: 24 GAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVNIGDK 83
Query: 181 GRIXPXRIXIRVEHV 225
R+ + +R EH+
Sbjct: 84 ERV----LIVRPEHL 94
>UniRef50_A4D227 Cluster: Similar to 60S RIBOSOMAL PROTEIN L21; n=1;
Homo sapiens|Rep: Similar to 60S RIBOSOMAL PROTEIN L21 -
Homo sapiens (Human)
Length = 112
Score = 38.7 bits (86), Expect = 0.025
Identities = 28/78 (35%), Positives = 38/78 (48%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 183
G +P +TYM+V K GD I G VQKG V K G V V A + N+ +G
Sbjct: 11 GVVPLATYMRVYKKGDTVDIKGIDIVQKGSSAGVTAAKLG-VDRVLQRA---VANR--QG 64
Query: 184 RIXPXRIXIRVEHVKHXK 237
+ +R+EH +H K
Sbjct: 65 QDSCRENYVRMEHTEHSK 82
>UniRef50_Q9UXE0 Cluster: 50S ribosomal protein L21e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L21e -
Sulfolobus solfataricus
Length = 101
Score = 36.7 bits (81), Expect = 0.10
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 4 GTIPX-STYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
G +P S M K GD + N +V +GMPH+ Y GK G++ A V V +
Sbjct: 24 GAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKIIGKRGRAYLVSVTLGDK 83
Query: 181 GRIXPXRIXIRVEHV 225
++ I +R EH+
Sbjct: 84 EKV----IIVRPEHL 94
>UniRef50_Q42194 Cluster: 60S ribosomal protein L21; n=10;
Magnoliophyta|Rep: 60S ribosomal protein L21 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 72
Score = 35.5 bits (78), Expect = 0.24
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKG 90
G IP STY++ KVG + GNGA+ KG
Sbjct: 23 GYIPLSTYLRTFKVGRLRRCQGNGAIHKG 51
>UniRef50_UPI0000DA1EED Cluster: PREDICTED: similar to 60S ribosomal
protein L21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L21 - Rattus norvegicus
Length = 122
Score = 34.3 bits (75), Expect = 0.55
Identities = 26/85 (30%), Positives = 36/85 (42%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 183
G +P TYM++ K D+ I G G VQK P V TA +
Sbjct: 23 GVVPLVTYMRIYKKVDVVDIKGMGTVQKECPKCV----------TTA--------QPEES 64
Query: 184 RIXPXRIXIRVEHVKHXKXRQDFLR 258
+ P I + +EH+KH K R L+
Sbjct: 65 TMSPSMISVWIEHIKHSKSRDSLLK 89
>UniRef50_Q6L228 Cluster: 50S ribosomal protein L21e; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L21e -
Picrophilus torridus
Length = 97
Score = 34.3 bits (75), Expect = 0.55
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 28 MKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTG 123
MK +VGD I+ N AV GMPH + G TG
Sbjct: 32 MKTFEVGDRAAIVINSAVPDGMPHHDFQGITG 63
>UniRef50_Q5MGB3 Cluster: Transposase; n=1; Phytophthora
infestans|Rep: Transposase - Phytophthora infestans
(Potato late blight fungus)
Length = 724
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 105 IPWKDRSRVQRDCSCSRCDCQQACSXKDYXEXH 203
I KDRSR R+C+ R +C+ DY E H
Sbjct: 622 IALKDRSRAIRECTVCRFECRNPTQKTDYCEKH 654
>UniRef50_A0RUT3 Cluster: Ribosomal protein L21E; n=2;
Thermoprotei|Rep: Ribosomal protein L21E - Cenarchaeum
symbiosum
Length = 102
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 19 STYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIXPX 198
S ++ GD II + KG+PH+ YHGK G V A V ++ R+ ++
Sbjct: 33 SFLLREYSAGDRALIIIDPRQHKGLPHRRYHGKVGTVKEAGRRA--VTLDVRLGEKM--K 88
Query: 199 RIXIRVEHVK 228
+ R +H+K
Sbjct: 89 TLITRYDHIK 98
>UniRef50_O28743 Cluster: 50S ribosomal protein L21e; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L21e -
Archaeoglobus fulgidus
Length = 97
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +1
Query: 25 YMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIXPXRI 204
+++ VG I A QKGMPH + G+TG V A +V R G++ +
Sbjct: 30 FLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRA--YLVQVRDGGKM--KTL 85
Query: 205 XIRVEHVK 228
+R EH+K
Sbjct: 86 IVRPEHLK 93
>UniRef50_Q8UCM9 Cluster: Iron-chelator utilization protein; n=1;
Agrobacterium tumefaciens str. C58|Rep: Iron-chelator
utilization protein - Agrobacterium tumefaciens (strain
C58 / ATCC 33970)
Length = 358
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 67 GNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVN 168
G+GA Q+ +P+ ++ GK R YN+T H ++V+
Sbjct: 97 GHGAEQRELPN-LFRGKVARAYNLTPHMRRLVVS 129
>UniRef50_A0DWE5 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_67, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 976
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 27 HESVQSWRHXXHHRQWCSSKGYATQSIPWKDRSRVQRDCSCSRC 158
H ++S+ + HR +C G QSIP +DR++ Q +C C
Sbjct: 898 HTFIESF-NSNDHRCYCHLLGTCNQSIPNRDRNKNQIQFNCKTC 940
>UniRef50_O74001 Cluster: 50S ribosomal protein L21e; n=15;
Archaea|Rep: 50S ribosomal protein L21e - Pyrococcus
horikoshii
Length = 97
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 4 GTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRV 129
G P + +++ +VG I+ + KGMP +HG+TG V
Sbjct: 24 GLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65
>UniRef50_A2TTQ4 Cluster: Sensor protein; n=9; Bacteroidetes|Rep:
Sensor protein - Dokdonia donghaensis MED134
Length = 535
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 79 VQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRV 177
VQK + K Y TG ++NV H LG+ KR+
Sbjct: 474 VQKKVFDKFYREHTGDIHNVKGHGLGLAYAKRI 506
>UniRef50_Q8E9X7 Cluster: ISSod7, transposase; n=27;
Gammaproteobacteria|Rep: ISSod7, transposase -
Shewanella oneidensis
Length = 440
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/41 (26%), Positives = 15/41 (36%)
Frame = +3
Query: 33 SVQSWRHXXHHRQWCSSKGYATQSIPWKDRSRVQRDCSCSR 155
S +W H WC Y S+ W+ VQ + R
Sbjct: 109 SANTWHARAEHPHWCGLNLYGVDSVVWRTPDSVQNQAAFGR 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,033,508
Number of Sequences: 1657284
Number of extensions: 3201257
Number of successful extensions: 8612
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 8441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8607
length of database: 575,637,011
effective HSP length: 63
effective length of database: 471,228,119
effective search space used: 10367018618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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