Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0899.Seq
         (259 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   0.53 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.70 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   2.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   2.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   4.9  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    19   8.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 0.53
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 94  PHKVYHGKTGR 126
           PH  Y GKTGR
Sbjct: 302 PHPTYFGKTGR 312


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 0.70
 Identities = 12/52 (23%), Positives = 18/52 (34%)
 Frame = +3

Query: 6   NYSXLHVHESVQSWRHXXHHRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCD 161
           +Y+ +   E + SWR     +      G      P    S V    +C  CD
Sbjct: 503 HYTNIISQEQIISWRSSDDAKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVCD 554


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 3   WNYSXLHVHESVQSW 47
           W Y  L+V++ +Q W
Sbjct: 238 WAYEKLNVNDGLQLW 252


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 140 VTLYTRPVFPWYTLCGIP 87
           V L    +  WYT+C +P
Sbjct: 9   VNLGLNGLIDWYTVCLVP 26


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 63  HRQWCSS 83
           HR WCSS
Sbjct: 232 HRSWCSS 238


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 3   WNYSXLHVHE 32
           WN+S +H+ E
Sbjct: 218 WNHSKVHIRE 227


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 114  SMVYFVWHTLLNCTIAY 64
            S +   W+ LLNC   +
Sbjct: 1119 SKIRICWNVLLNCVYLF 1135


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +3

Query: 144 SCSRCDCQQACSXK 185
           +C RCD +Q  + +
Sbjct: 63  NCERCDSRQVANAR 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,338
Number of Sequences: 336
Number of extensions: 761
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)