Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0899.Seq
         (259 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p pro...   134   1e-32
AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p pro...   134   1e-32
AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-P...   134   1e-32
AE014298-789|AAN09151.2|  312|Drosophila melanogaster CG15771-PB...    27   4.8  
AE014298-788|AAF46077.4|  355|Drosophila melanogaster CG15771-PA...    27   4.8  

>BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p
           protein.
          Length = 159

 Score =  134 bits (325), Expect = 1e-32
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
           HG IP STYM+V K+GDI  I G+GAVQKG+P+K YHGKTGR++NVT HA+GVIVNKRVR
Sbjct: 22  HGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGVIVNKRVR 81

Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
           G+I   R+ +R+EH+ H K R+DFLR
Sbjct: 82  GKILAKRVNVRIEHIHHSKCREDFLR 107


>AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p
           protein.
          Length = 159

 Score =  134 bits (325), Expect = 1e-32
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
           HG IP STYM+V K+GDI  I G+GAVQKG+P+K YHGKTGR++NVT HA+GVIVNKRVR
Sbjct: 22  HGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGVIVNKRVR 81

Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
           G+I   R+ +R+EH+ H K R+DFLR
Sbjct: 82  GKILAKRVNVRIEHIHHSKCREDFLR 107


>AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-PA
           protein.
          Length = 159

 Score =  134 bits (325), Expect = 1e-32
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   HGTIPXSTYMKVXKVGDIXXIIGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVR 180
           HG IP STYM+V K+GDI  I G+GAVQKG+P+K YHGKTGR++NVT HA+GVIVNKRVR
Sbjct: 22  HGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGVIVNKRVR 81

Query: 181 GRIXPXRIXIRVEHVKHXKXRQDFLR 258
           G+I   R+ +R+EH+ H K R+DFLR
Sbjct: 82  GKILAKRVNVRIEHIHHSKCREDFLR 107


>AE014298-789|AAN09151.2|  312|Drosophila melanogaster CG15771-PB,
           isoform B protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 30  ESVQSWRHXXHHRQWCSSKGYATQSIPWKDRSRVQRDCSC 149
           E  Q   H  H RQW   +G    S+P  D S  + + SC
Sbjct: 272 EQQQQHHHHHHQRQWLYRRGV---SLPAMDCSNSEAENSC 308


>AE014298-788|AAF46077.4|  355|Drosophila melanogaster CG15771-PA,
           isoform A protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 30  ESVQSWRHXXHHRQWCSSKGYATQSIPWKDRSRVQRDCSC 149
           E  Q   H  H RQW   +G    S+P  D S  + + SC
Sbjct: 315 EQQQQHHHHHHQRQWLYRRGV---SLPAMDCSNSEAENSC 351


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,512,321
Number of Sequences: 53049
Number of extensions: 164118
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)