SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0892.Seq
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P07856 Cluster: Sericin 1 precursor; n=4; Bombyx mori|R...    73   6e-12
UniRef50_Q5DEH6 Cluster: SJCHGC02755 protein; n=2; Schistosoma j...    37   0.35 
UniRef50_Q3BWS8 Cluster: Phospholipase C precursor; n=7; Xanthom...    34   1.9  
UniRef50_A5K7A2 Cluster: Putative uncharacterized protein; n=3; ...    34   1.9  
UniRef50_UPI00015609DE Cluster: PREDICTED: similar to family wit...    34   2.5  
UniRef50_O73592 Cluster: CMIX; n=2; Gallus gallus|Rep: CMIX - Ga...    34   2.5  
UniRef50_A7RBY3 Cluster: Putative uncharacterized protein c530R;...    34   2.5  
UniRef50_UPI0000ECA7B4 Cluster: UPI0000ECA7B4 related cluster; n...    33   4.4  
UniRef50_Q6K2H1 Cluster: Putative uncharacterized protein OSJNBa...    33   4.4  
UniRef50_Q126F2 Cluster: Transcriptional regulator, IclR family;...    33   5.8  
UniRef50_A7DJS8 Cluster: Lytic transglycosylase, catalytic precu...    32   7.6  
UniRef50_A1FRZ4 Cluster: VirB8 precursor; n=2; Xanthomonadaceae|...    32   7.6  
UniRef50_Q7XRV5 Cluster: OSJNBb0049I21.7 protein; n=1; Oryza sat...    32   7.6  
UniRef50_Q4P4H4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.6  
UniRef50_Q0UG02 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   7.6  

>UniRef50_P07856 Cluster: Sericin 1 precursor; n=4; Bombyx mori|Rep:
            Sericin 1 precursor - Bombyx mori (Silk moth)
          Length = 1186

 Score = 72.5 bits (170), Expect = 6e-12
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -1

Query: 257  QLLHKPGQGKICLCFENIFDIPYHLRKNIGV 165
            +LLHKPGQGKICLCFENIFDIPYHLRKNIGV
Sbjct: 1156 RLLHKPGQGKICLCFENIFDIPYHLRKNIGV 1186


>UniRef50_Q5DEH6 Cluster: SJCHGC02755 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC02755 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 260

 Score = 36.7 bits (81), Expect = 0.35
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -3

Query: 435 QSXXTDKRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLP 301
           Q   T   APT PA P P  A+PG A P     +P+  Q   T P
Sbjct: 150 QPPTTKPAAPTKPAPPTPQPAKPGAAPPKSPAPVPKVAQPPTTKP 194


>UniRef50_Q3BWS8 Cluster: Phospholipase C precursor; n=7;
           Xanthomonas|Rep: Phospholipase C precursor - Xanthomonas
           campestris pv. vesicatoria (strain 85-10)
          Length = 699

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = -3

Query: 420 DKRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVH 313
           DK  P+VPAA   P+  PGQ +P +A  LP A+QVH
Sbjct: 482 DKPLPSVPAAAAMPRQEPGQ-RPARA--LPYALQVH 514


>UniRef50_A5K7A2 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3599

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -2

Query: 283  SRSHHSGVNSFYTSLVKEKYAFASKTYSIFLTISVRISVFNTTKHD 146
            ++  H GVN    +L KEKY F + T S+ LT +    V N  K D
Sbjct: 986  NKIEHDGVNKSLDNLAKEKYKFDNNTNSLELTDAESKKVHNEHKDD 1031


>UniRef50_UPI00015609DE Cluster: PREDICTED: similar to family with
           sequence similarity 48, member A; n=2; Equus
           caballus|Rep: PREDICTED: similar to family with sequence
           similarity 48, member A - Equus caballus
          Length = 953

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 402 VPAAPIPPQARPGQAQPLQAVLLPRAV-QVHRTLPPLRLVFPGVII 268
           V + P+P   RPGQ+ PLQ V L  A+ Q+ + +  LR++ P V +
Sbjct: 703 VLSPPVPALQRPGQSLPLQRVQLSSALQQLQQQIQHLRILQPPVAV 748


>UniRef50_O73592 Cluster: CMIX; n=2; Gallus gallus|Rep: CMIX -
           Gallus gallus (Chicken)
          Length = 210

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 20/47 (42%), Positives = 22/47 (46%)
 Frame = -3

Query: 417 KRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPG 277
           +R P  P AP PP   P Q  P  A  L RA + HR  PP     PG
Sbjct: 116 QRGPPRPGAPAPPPPPP-QRSPCGAAPLLRAREEHREWPPRAAGPPG 161


>UniRef50_A7RBY3 Cluster: Putative uncharacterized protein c530R;
           n=1; Chlorella virus AR158|Rep: Putative uncharacterized
           protein c530R - Chlorella virus AR158
          Length = 79

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 395 QHRFHLKHVRGKHNHFRQFFYLGRFKYIGRFLHF 294
           +H  H +H R    HFR F + G F++ G F HF
Sbjct: 12  RHFRHFRHFR-HFRHFRHFRHFGHFRHFGHFGHF 44



 Score = 32.3 bits (70), Expect = 7.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 395 QHRFHLKHVRGKHNHFRQFFYLGRFKYIGRFLHF 294
           +H  H +H R    HFR F + G F + G F HF
Sbjct: 21  RHFRHFRHFR-HFGHFRHFGHFGHFGHFGHFGHF 53


>UniRef50_UPI0000ECA7B4 Cluster: UPI0000ECA7B4 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECA7B4 UniRef100 entry -
           Gallus gallus
          Length = 559

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 414 RAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGV 274
           R+P  P AP+ P A  G A P Q    P ++Q + T+ P     PG+
Sbjct: 151 RSPRSPQAPLTPGAPRGPASPCQGWRPPGSLQKNHTVGPALSPAPGL 197


>UniRef50_Q6K2H1 Cluster: Putative uncharacterized protein
           OSJNBa0052M16.7; n=2; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0052M16.7 - Oryza sativa
           subsp. japonica (Rice)
          Length = 268

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 417 KRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 280
           KR P  P +P+ P+  P Q QP Q      A +VH   PP   +FP
Sbjct: 150 KRRPPPPPSPMSPKVTPAQQQPPQP-----AEKVHDASPPPSSLFP 190


>UniRef50_Q126F2 Cluster: Transcriptional regulator, IclR family;
           n=10; Proteobacteria|Rep: Transcriptional regulator,
           IclR family - Polaromonas sp. (strain JS666 / ATCC
           BAA-500)
          Length = 278

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -3

Query: 411 APTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGVIIQA*TAFT 247
           A   P  P     R G   P  A +L R +    TLP LR ++P   ++A +A T
Sbjct: 126 AKVAPPTPFASSVRVGTRLPAHATVLGRVLLQDLTLPELRAIYPEDHLEAFSAST 180


>UniRef50_A7DJS8 Cluster: Lytic transglycosylase, catalytic
           precursor; n=2; Methylobacterium extorquens PA1|Rep:
           Lytic transglycosylase, catalytic precursor -
           Methylobacterium extorquens PA1
          Length = 298

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -3

Query: 399 PAAPIPPQARPGQAQPLQAVLLP---RAVQVHRTLPPLR 292
           P APIP QA P QA  LQA   P    A  V   LPP R
Sbjct: 223 PQAPIPAQAAPQQAAALQAAAAPTMAAADAVEVPLPPRR 261


>UniRef50_A1FRZ4 Cluster: VirB8 precursor; n=2;
           Xanthomonadaceae|Rep: VirB8 precursor - Stenotrophomonas
           maltophilia R551-3
          Length = 351

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 402 VPAAPIPPQARPGQAQPLQAVLLP 331
           +PA P+P QA PGQA P Q  + P
Sbjct: 313 MPAQPVPGQATPGQAMPGQPAMRP 336


>UniRef50_Q7XRV5 Cluster: OSJNBb0049I21.7 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: OSJNBb0049I21.7 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 380

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = -3

Query: 420 DKRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHR 310
           DK   T+P AP PPQ  PG+A P  A ++P   Q+ R
Sbjct: 146 DKAKATLPPAPFPPQ-HPGRADP--AEMMPPTKQIVR 179


>UniRef50_Q4P4H4 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 722

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 27/76 (35%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
 Frame = -3

Query: 411 APTVPA-APIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGVIIQA*TAFTQAWS 235
           APT P  AP P QA     QP      P A  V    PPL+ V    +  A T    A S
Sbjct: 324 APTKPTDAPAPQQASSSSVQPALTAPDPSASTVRPPAPPLQSVGAPQLAAA-TTTPFASS 382

Query: 234 RKNMPLLRKHIRYSLP 187
               PL+  H   S P
Sbjct: 383 STTAPLIVSHNAASKP 398


>UniRef50_Q0UG02 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 402

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 411 APTVPAAPIPPQARPGQAQPLQAVLLP 331
           AP VP AP+ P ARP    P+ A++ P
Sbjct: 49  APIVPPAPVAPVARPAPVAPIIAIVPP 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,394,970
Number of Sequences: 1657284
Number of extensions: 8075392
Number of successful extensions: 25535
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25401
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -