Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0892.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.19 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    25   0.58 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    25   0.58 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    25   0.58 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 117 NLKHYKEYSKSCLVVLNTDILTEMVRNI--EYVFEAKAYFSLTR 242
           N+K  K   + C + +N   L E  RN+  + +F  +AYF  +R
Sbjct: 718 NMKLEKVPGECCAICVNATSLVESNRNVPQKCIFNGQAYFPGSR 761


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -2

Query: 226 YAFASKTYSIFLTISVRISVFNTTKHDLEYSL 131
           YA    TYS+F+  ++ ++V+  T   +++ +
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -2

Query: 226 YAFASKTYSIFLTISVRISVFNTTKHDLEYSL 131
           YA    TYS+F+  ++ ++V+  T   +++ +
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -2

Query: 226 YAFASKTYSIFLTISVRISVFNTTKHDLEYSL 131
           YA    TYS+F+  ++ ++V+  T   +++ +
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 226 YAFASKTYSIFLT-ISVRISVFNTTKHDLEY 137
           Y + +KTYS+F+  ++V +  F     +L+Y
Sbjct: 168 YQYGTKTYSLFIVFMTVILPYFINLLMELQY 198


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 226 YAFASKTYSIFLT-ISVRISVFNTTKHDLEY 137
           Y + +KTYS+F+  ++V +  F     +L+Y
Sbjct: 168 YQYGTKTYSLFIVFMTVILPYFINLLMELQY 198


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -3

Query: 420  DKRAPTVPAAPIPPQARPG 364
            D   P  P  P PPQ   G
Sbjct: 1002 DCTKPPEPVTPAPPQVTTG 1020


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,952
Number of Sequences: 336
Number of extensions: 2119
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)