Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0889.Seq
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   8.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   8.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   8.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   8.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   8.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   8.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   8.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 73  GGARAVVSKSHPSW 32
           G A    S+SHP W
Sbjct: 343 GNAHNCPSRSHPVW 356


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 73  GGARAVVSKSHPSW 32
           G A    S+SHP W
Sbjct: 350 GNAHNCPSRSHPVW 363


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 ESRPAEKIRRETQRADAW 185
           +SRPA +I     R  AW
Sbjct: 259 KSRPARQIALTVPRYQAW 276


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 ESRPAEKIRRETQRADAW 185
           +SRPA +I     R  AW
Sbjct: 259 KSRPARQIALTVPRYQAW 276


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 ESRPAEKIRRETQRADAW 185
           +SRPA +I     R  AW
Sbjct: 259 KSRPARQIALTVPRYQAW 276


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 ESRPAEKIRRETQRADAW 185
           +SRPA +I     R  AW
Sbjct: 259 KSRPARQIALTVPRYQAW 276


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 132 ESRPAEKIRRETQRADAW 185
           +SRPA +I     R  AW
Sbjct: 259 KSRPARQIALTVPRYQAW 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,890
Number of Sequences: 336
Number of extensions: 1004
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)