Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0889.Seq
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE...    28   2.8  
AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB...    28   2.8  
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD...    28   2.8  
AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p pro...    27   8.6  
AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-P...    27   8.6  

>AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE,
            isoform E protein.
          Length = 2832

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 3    QDRWATQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEK 152
            ++R  T   + E W L   A   P +  Q+ + CF  E T+ +     EK
Sbjct: 2311 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEK 2360


>AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB,
            isoform B protein.
          Length = 3703

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 3    QDRWATQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEK 152
            ++R  T   + E W L   A   P +  Q+ + CF  E T+ +     EK
Sbjct: 2102 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEK 2151


>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
            isoform D protein.
          Length = 3912

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 3    QDRWATQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEK 152
            ++R  T   + E W L   A   P +  Q+ + CF  E T+ +     EK
Sbjct: 2311 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEK 2360


>AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p
           protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 141 PAEKIRRETQRADAWVRLHGELFVE 215
           P EK+R   Q  +A V+ HGE  VE
Sbjct: 169 PFEKVRHGKQEFEAIVKAHGEASVE 193


>AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-PA
           protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 141 PAEKIRRETQRADAWVRLHGELFVE 215
           P EK+R   Q  +A V+ HGE  VE
Sbjct: 169 PFEKVRHGKQEFEAIVKAHGEASVE 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,981,561
Number of Sequences: 53049
Number of extensions: 220080
Number of successful extensions: 431
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)