BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0889.Seq (349 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE... 28 2.8 AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB... 28 2.8 AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD... 28 2.8 AY069312-1|AAL39457.1| 283|Drosophila melanogaster LD02616p pro... 27 8.6 AE014298-1933|AAF48295.2| 283|Drosophila melanogaster CG11176-P... 27 8.6 >AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE, isoform E protein. Length = 2832 Score = 28.3 bits (60), Expect = 2.8 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +3 Query: 3 QDRWATQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEK 152 ++R T + E W L A P + Q+ + CF E T+ + EK Sbjct: 2311 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEK 2360 >AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB, isoform B protein. Length = 3703 Score = 28.3 bits (60), Expect = 2.8 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +3 Query: 3 QDRWATQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEK 152 ++R T + E W L A P + Q+ + CF E T+ + EK Sbjct: 2102 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEK 2151 >AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD, isoform D protein. Length = 3912 Score = 28.3 bits (60), Expect = 2.8 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +3 Query: 3 QDRWATQRLSQEGWDLLTTARAPPKET*QLKSNCFANESTTGSESRPAEK 152 ++R T + E W L A P + Q+ + CF E T+ + EK Sbjct: 2311 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEK 2360 >AY069312-1|AAL39457.1| 283|Drosophila melanogaster LD02616p protein. Length = 283 Score = 26.6 bits (56), Expect = 8.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 141 PAEKIRRETQRADAWVRLHGELFVE 215 P EK+R Q +A V+ HGE VE Sbjct: 169 PFEKVRHGKQEFEAIVKAHGEASVE 193 >AE014298-1933|AAF48295.2| 283|Drosophila melanogaster CG11176-PA protein. Length = 283 Score = 26.6 bits (56), Expect = 8.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 141 PAEKIRRETQRADAWVRLHGELFVE 215 P EK+R Q +A V+ HGE VE Sbjct: 169 PFEKVRHGKQEFEAIVKAHGEASVE 193 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,981,561 Number of Sequences: 53049 Number of extensions: 220080 Number of successful extensions: 431 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 431 length of database: 24,988,368 effective HSP length: 76 effective length of database: 20,956,644 effective search space used: 817309116 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -