Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0887.Seq
(449 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 26 0.14
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 25 0.43
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 25 0.43
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 25 0.43
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 1.0
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 1.0
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 23 1.8
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 23 1.8
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 20 9.4
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 20 9.4
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 20 9.4
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 20 9.4
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 20 9.4
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 26.2 bits (55), Expect = 0.14
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 96 NLKHYKEYSKSCLVVLNTDILTEMVRNI--EYVFEAKAYFSLTR 221
N+K K + C + +N L E RN+ + +F +AYF +R
Sbjct: 718 NMKLEKVPGECCAICVNATSLVESNRNVPQKCIFNGQAYFPGSR 761
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 24.6 bits (51), Expect = 0.43
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -2
Query: 205 YAFASKTYSIFLTISVRISVFNTTKHDLEYSL 110
YA TYS+F+ ++ ++V+ T +++ +
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 24.6 bits (51), Expect = 0.43
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -2
Query: 205 YAFASKTYSIFLTISVRISVFNTTKHDLEYSL 110
YA TYS+F+ ++ ++V+ T +++ +
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 24.6 bits (51), Expect = 0.43
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -2
Query: 205 YAFASKTYSIFLTISVRISVFNTTKHDLEYSL 110
YA TYS+F+ ++ ++V+ T +++ +
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 23.4 bits (48), Expect = 1.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 203 IFFLDQACVKVCSRLNDAP 259
I+ L AC C + ND P
Sbjct: 303 IYLLVYACASTCEQANDTP 321
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 23.4 bits (48), Expect = 1.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 203 IFFLDQACVKVCSRLNDAP 259
I+ L AC C + ND P
Sbjct: 303 IYLLVYACASTCEQANDTP 321
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 22.6 bits (46), Expect = 1.8
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 205 YAFASKTYSIFLT-ISVRISVFNTTKHDLEY 116
Y + +KTYS+F+ ++V + F +L+Y
Sbjct: 168 YQYGTKTYSLFIVFMTVILPYFINLLMELQY 198
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 22.6 bits (46), Expect = 1.8
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 205 YAFASKTYSIFLT-ISVRISVFNTTKHDLEY 116
Y + +KTYS+F+ ++V + F +L+Y
Sbjct: 168 YQYGTKTYSLFIVFMTVILPYFINLLMELQY 198
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 146 HRYSYGDGKEYRIC 187
H +SY G +Y IC
Sbjct: 148 HGFSYKCGIQYHIC 161
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 168 VRNIEYVFEAKAYFSLTR 221
+ +E F K +FS+TR
Sbjct: 338 IGTLEVAFTGKNFFSITR 355
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 168 VRNIEYVFEAKAYFSLTR 221
+ +E F K +FS+TR
Sbjct: 373 IGTLEVAFTGKNFFSITR 390
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 168 VRNIEYVFEAKAYFSLTR 221
+ +E F K +FS+TR
Sbjct: 373 IGTLEVAFTGKNFFSITR 390
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 146 HRYSYGDGKEYRIC 187
H +SY G +Y IC
Sbjct: 144 HGFSYKCGIQYHIC 157
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,323
Number of Sequences: 336
Number of extensions: 1931
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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