Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0887.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    27   0.40 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   1.2  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   1.6  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    24   2.8  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        22   8.7  

>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 158 YGDGKEYRICFRSKGIFFLDQACVKVCSRLNDAPGNTRRS 277
           Y     Y +C  ++ +     AC K C+ LND P   R S
Sbjct: 26  YAHPYPYDLCGPNEELLECGTACPKTCADLNDPPKCVRYS 65


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 406 SSTPIXEHRQATAXIPP 356
           SSTP+   ++ATA +PP
Sbjct: 671 SSTPVRRSQRATAGVPP 687


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -2

Query: 424 TKRXGQSSTPIXEHRQATAXIPPQARPGKHNHFRQFFXL 308
           +KR   +   + E        PP  RP      RQFF L
Sbjct: 499 SKRNAHTMASLREKLVDGGSTPPHCRPSDIEEIRQFFWL 537


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 158 YGDGKEYRICFRSKGIFFLDQACVKVCSRLNDAP 259
           Y     Y +C  ++       AC K C+ LND P
Sbjct: 26  YAHPYPYDLCGPNEEFQECGTACPKTCADLNDLP 59


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 198 LLRKHIRYSLPSP 160
           LL +HI+Y +P P
Sbjct: 82  LLHEHIKYDVPKP 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,885
Number of Sequences: 2352
Number of extensions: 8540
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)