Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0887.Seq
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029416-1|AAH29416.1|  127|Homo sapiens GDPD5 protein protein.        29   9.7  
BC020203-1|AAH20203.1|  127|Homo sapiens GDPD5 protein protein.        29   9.7  
AF217989-1|AAG17232.1|  127|Homo sapiens unknown protein.              29   9.7  

>BC029416-1|AAH29416.1|  127|Homo sapiens GDPD5 protein protein.
          Length = 127

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 328 SGCACPDVLEVESVLLPVGARLSVWMTDLCA 420
           S C C +  E  +V+LP G   S+++  LC+
Sbjct: 21  SSCLCQEAPEFSAVILPQGPGPSLYLKQLCS 51


>BC020203-1|AAH20203.1|  127|Homo sapiens GDPD5 protein protein.
          Length = 127

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 328 SGCACPDVLEVESVLLPVGARLSVWMTDLCA 420
           S C C +  E  +V+LP G   S+++  LC+
Sbjct: 21  SSCLCQEAPEFSAVILPQGPGPSLYLKQLCS 51


>AF217989-1|AAG17232.1|  127|Homo sapiens unknown protein.
          Length = 127

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 328 SGCACPDVLEVESVLLPVGARLSVWMTDLCA 420
           S C C +  E  +V+LP G   S+++  LC+
Sbjct: 21  SSCLCQEAPEFSAVILPQGPGPSLYLKQLCS 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,920,928
Number of Sequences: 237096
Number of extensions: 1115451
Number of successful extensions: 1565
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)