Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0887.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1061|AAF50702.3|  866|Drosophila melanogaster CG6619-PA...    30   1.7  
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB...    27   8.8  
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA...    27   8.8  
AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA...    27   8.8  

>AE014296-1061|AAF50702.3|  866|Drosophila melanogaster CG6619-PA
           protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 405 HPHR*XSTDRQQHXFHLKHVRAXXXXXXXXXXSAVQVHRTL 283
           HPH+  S  +QQH +H  H +A            ++ H++L
Sbjct: 51  HPHQHYSQSQQQHLYHQSHQQASHYVNGTGSLGRLKFHKSL 91


>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
           isoform B protein.
          Length = 3313

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 279 EEASDVLEPPRXKNCLKWLCLPGR 350
           ++  D LE P  KNC KW   P +
Sbjct: 925 DDVEDKLENPTKKNCAKWEAKPDK 948


>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
           isoform A protein.
          Length = 3313

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 279 EEASDVLEPPRXKNCLKWLCLPGR 350
           ++  D LE P  KNC KW   P +
Sbjct: 925 DDVEDKLENPTKKNCAKWEAKPDK 948


>AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA
           protein.
          Length = 819

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 436 SGXGTKRXGQSSTPIXEHRQATAXIPPQAR 347
           +G G  R  + STP   H + TA  PP++R
Sbjct: 675 AGMGAGRTPKHSTPQLNHNKYTAPSPPRSR 704


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,561,580
Number of Sequences: 53049
Number of extensions: 348893
Number of successful extensions: 798
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)