BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0887.Seq (449 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-1061|AAF50702.3| 866|Drosophila melanogaster CG6619-PA... 30 1.7 AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB... 27 8.8 AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA... 27 8.8 AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA... 27 8.8 >AE014296-1061|AAF50702.3| 866|Drosophila melanogaster CG6619-PA protein. Length = 866 Score = 29.9 bits (64), Expect = 1.7 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = -3 Query: 405 HPHR*XSTDRQQHXFHLKHVRAXXXXXXXXXXSAVQVHRTL 283 HPH+ S +QQH +H H +A ++ H++L Sbjct: 51 HPHQHYSQSQQQHLYHQSHQQASHYVNGTGSLGRLKFHKSL 91 >AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB, isoform B protein. Length = 3313 Score = 27.5 bits (58), Expect = 8.8 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 279 EEASDVLEPPRXKNCLKWLCLPGR 350 ++ D LE P KNC KW P + Sbjct: 925 DDVEDKLENPTKKNCAKWEAKPDK 948 >AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA, isoform A protein. Length = 3313 Score = 27.5 bits (58), Expect = 8.8 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 279 EEASDVLEPPRXKNCLKWLCLPGR 350 ++ D LE P KNC KW P + Sbjct: 925 DDVEDKLENPTKKNCAKWEAKPDK 948 >AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA protein. Length = 819 Score = 27.5 bits (58), Expect = 8.8 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 436 SGXGTKRXGQSSTPIXEHRQATAXIPPQAR 347 +G G R + STP H + TA PP++R Sbjct: 675 AGMGAGRTPKHSTPQLNHNKYTAPSPPRSR 704 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,561,580 Number of Sequences: 53049 Number of extensions: 348893 Number of successful extensions: 798 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 787 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 798 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1455824790 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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