Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0885.Seq
(329 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 29 0.034
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 3.9
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 22 5.2
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 22 5.2
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 22 5.2
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 22 5.2
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 22 5.2
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 22 6.9
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 21 9.1
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 21 9.1
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 29.5 bits (63), Expect = 0.034
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 186 REQRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNSLAQV 323
R + P + R + RP + HS S+ST SS RNS+ ++
Sbjct: 914 RASQSPLSNLRRKGPQVRPTLTPRHSERALLSDSTSSSERNSVGRL 959
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 270 ACCCGAHVRGGVLQRDHAHHPRLDSAV 190
A C + +L AHHP L+ A+
Sbjct: 226 AACSSVYPASSLLLPQDAHHPALEIAL 252
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 195 RYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
RY + D + E R+ S PN S + ++ NS
Sbjct: 168 RYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNS 206
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 195 RYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
RY + D + E R+ S PN S + ++ NS
Sbjct: 168 RYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNS 206
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 195 RYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
RY + D + E R+ S PN S + ++ NS
Sbjct: 120 RYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNS 158
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 195 RYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
RY + D + E R+ S PN S + ++ NS
Sbjct: 168 RYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNS 206
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 116 NEITAKVRAAVPLGRRAEGDKDK 48
+E + V A P+GR A KDK
Sbjct: 1025 SETSTPVAATTPVGRMAAVPKDK 1047
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 21.8 bits (44), Expect = 6.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 183 QREQRYPTEDDERDPVEARP 242
QR+Q+ P + ++ P + RP
Sbjct: 459 QRQQQQPQQQQQQRPQQQRP 478
Score = 21.4 bits (43), Expect = 9.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 179 KAYEMNKAQVDANLELARAKINEITAKVRAAVPLGR 72
+AY A + L+ + K+ +KVRAA P R
Sbjct: 622 RAYVRLPAMFVSELDGTKIKLGFCVSKVRAAPPTPR 657
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -1
Query: 200 IALFTLPKAYEMNKAQVDANLELARAKINEITAKVRA 90
+A +PK + +N A+ + +NE+ K RA
Sbjct: 51 VAGVAIPKVHRLNFAERKQQRQSKHLDLNELERKRRA 87
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 222 HAHHPRLDSAVHAAEGL 172
H HHP +A+HA G+
Sbjct: 349 HHHHPGHHAALHAHLGV 365
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,128
Number of Sequences: 2352
Number of extensions: 2731
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -