BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0885.Seq
(329 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p pro... 90 7e-19
AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p pro... 90 7e-19
AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC... 90 7e-19
AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA... 90 7e-19
AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG... 90 7e-19
AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD... 90 7e-19
AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE... 90 7e-19
AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB... 90 7e-19
AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF... 90 7e-19
AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-P... 29 1.4
BT012333-1|AAS77458.1| 374|Drosophila melanogaster AT16912p pro... 28 2.5
AY071572-1|AAL49194.1| 374|Drosophila melanogaster RE63320p pro... 28 2.5
AE014297-1873|AAN13611.1| 374|Drosophila melanogaster CG14853-P... 28 2.5
AE014297-1872|AAF55078.2| 374|Drosophila melanogaster CG14853-P... 28 2.5
AE014134-2600|AAF53460.2| 1073|Drosophila melanogaster CG18482-P... 28 2.5
BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p pro... 28 3.3
AY094956-1|AAM11309.1| 897|Drosophila melanogaster SD01232p pro... 28 3.3
AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB... 28 3.3
AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA... 28 3.3
U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein. 27 4.3
BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p pro... 27 4.3
AF217281-1|AAF27637.1| 1616|Drosophila melanogaster ecdysone-ind... 27 4.3
AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC... 27 4.3
AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB... 27 4.3
AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA... 27 4.3
AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-P... 27 4.3
BT022140-1|AAY51535.1| 660|Drosophila melanogaster IP01538p pro... 27 5.7
AE014134-917|AAF52249.1| 660|Drosophila melanogaster CG6604-PA ... 27 5.7
U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-li... 27 7.5
AY058698-1|AAL13927.1| 604|Drosophila melanogaster LD41750p pro... 27 7.5
AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog... 27 7.5
AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA ... 27 7.5
AE014296-1556|AAF50341.1| 604|Drosophila melanogaster CG5064-PA... 27 7.5
BT016107-1|AAV36992.1| 704|Drosophila melanogaster LD14822p pro... 26 10.0
AF145688-1|AAD38663.1| 1420|Drosophila melanogaster BcDNA.LD2605... 26 10.0
AE014134-3367|AAF53982.1| 704|Drosophila melanogaster CG8679-PA... 26 10.0
AE013599-1169|AAF58755.1| 1420|Drosophila melanogaster CG12340-P... 26 10.0
>BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p
protein.
Length = 458
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 384 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 443
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 444 GNKKPEAAAESEKDK 458
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 365 RLFLVEDIIDSIKFGVILW 383
>AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p
protein.
Length = 234
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 160 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 219
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 220 GNKKPEAAAESEKDK 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 141 RLFLVEDIIDSIKFGVILW 159
>AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC,
isoform C protein.
Length = 202
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 128 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 187
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 188 GNKKPEAAAESEKDK 202
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 109 RLFLVEDIIDSIKFGVILW 127
>AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA,
isoform A protein.
Length = 222
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 148 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 207
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 208 GNKKPEAAAESEKDK 222
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 129 RLFLVEDIIDSIKFGVILW 147
>AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG,
isoform G protein.
Length = 224
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 150 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 209
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 210 GNKKPEAAAESEKDK 224
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 131 RLFLVEDIIDSIKFGVILW 149
>AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD,
isoform D protein.
Length = 224
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 150 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 209
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 210 GNKKPEAAAESEKDK 224
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 131 RLFLVEDIIDSIKFGVILW 149
>AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE,
isoform E protein.
Length = 234
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 160 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 219
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 220 GNKKPEAAAESEKDK 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 141 RLFLVEDIIDSIKFGVILW 159
>AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB,
isoform B protein.
Length = 234
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 160 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 219
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 220 GNKKPEAAAESEKDK 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 141 RLFLVEDIIDSIKFGVILW 159
>AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF,
isoform F protein.
Length = 595
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Frame = -1
Query: 257 VLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 78
V TYVGA FNG+TL+IL +++LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+
Sbjct: 521 VFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPI 580
Query: 77 GRR-----AEGDKDK 48
G + AE +KDK
Sbjct: 581 GNKKPEAAAESEKDK 595
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 313 RLFLVEDXVDSLKFGVLLW 257
RLFLVED +DS+KFGV+LW
Sbjct: 502 RLFLVEDIIDSIKFGVILW 520
>AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-PA
protein.
Length = 3298
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNSLAQV 323
P + R RP + HS S+ST SS RNSL ++
Sbjct: 1045 PLSNFRRRTTGVRPTLTPRHSERALLSDSTSSSERNSLGRL 1085
>BT012333-1|AAS77458.1| 374|Drosophila melanogaster AT16912p
protein.
Length = 374
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
P +D +DP HV H+ + + S + S+RNS
Sbjct: 249 PIDDAGQDPAALAVHVHHSHTHSHSHSHNDSGSSRNS 285
>AY071572-1|AAL49194.1| 374|Drosophila melanogaster RE63320p
protein.
Length = 374
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
P +D +DP HV H+ + + S + S+RNS
Sbjct: 249 PIDDAGQDPAALAVHVHHSHTHSHSHSHNDSGSSRNS 285
>AE014297-1873|AAN13611.1| 374|Drosophila melanogaster CG14853-PB,
isoform B protein.
Length = 374
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
P +D +DP HV H+ + + S + S+RNS
Sbjct: 249 PIDDAGQDPAALAVHVHHSHTHSHSHSHNDSGSSRNS 285
>AE014297-1872|AAF55078.2| 374|Drosophila melanogaster CG14853-PA,
isoform A protein.
Length = 374
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
P +D +DP HV H+ + + S + S+RNS
Sbjct: 249 PIDDAGQDPAALAVHVHHSHTHSHSHSHNDSGSSRNS 285
>AE014134-2600|AAF53460.2| 1073|Drosophila melanogaster CG18482-PA
protein.
Length = 1073
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +3
Query: 201 PTEDDERDP---VEARPHVREHHSSTPNFSESTXSSTRNS 311
P+ DD R P +PH R H +S P+ SST S
Sbjct: 960 PSADDHRWPSTIATIKPHPRPHPNSHPSIGSPAQSSTTTS 999
>BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p protein.
Length = 1283
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSS 299
PT D R+ +E + V H STP+ S S +S
Sbjct: 1120 PTSPDLREMLEGQQRVIAHSGSTPSSSSSARTS 1152
>AY094956-1|AAM11309.1| 897|Drosophila melanogaster SD01232p
protein.
Length = 897
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSS 299
PT D R+ +E + V H STP+ S S +S
Sbjct: 814 PTSPDLREMLEGQQRVIAHSGSTPSSSSSARTS 846
>AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB,
isoform B protein.
Length = 1283
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSS 299
PT D R+ +E + V H STP+ S S +S
Sbjct: 1120 PTSPDLREMLEGQQRVIAHSGSTPSSSSSARTS 1152
>AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA,
isoform A protein.
Length = 1283
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 201 PTEDDERDPVEARPHVREHHSSTPNFSESTXSS 299
PT D R+ +E + V H STP+ S S +S
Sbjct: 1120 PTSPDLREMLEGQQRVIAHSGSTPSSSSSARTS 1152
>U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein.
Length = 1113
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 192 QRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
Q+ + D + VE +PHV+ HSS + E + S
Sbjct: 65 QQTQSVDQQPQSVEQQPHVKSEHSSPVHIKEELHQQQQQS 104
>BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p
protein.
Length = 1113
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 192 QRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
Q+ + D + VE +PHV+ HSS + E + S
Sbjct: 65 QQTQSVDQQPQSVEQQPHVKSEHSSPVHIKEELHQQQQQS 104
>AF217281-1|AAF27637.1| 1616|Drosophila melanogaster
ecdysone-inducible gene E1 protein.
Length = 1616
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 198 YPTEDDERDPVEARPHVREHHSSTPNFSEST 290
YPT DDE PVE P E + P +E+T
Sbjct: 741 YPTNDDELAPVEIEP---ELTTEEPEIAENT 768
>AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC,
isoform C protein.
Length = 1113
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 192 QRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
Q+ + D + VE +PHV+ HSS + E + S
Sbjct: 65 QQTQSVDQQPQSVEQQPHVKSEHSSPVHIKEELHQQQQQS 104
>AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB,
isoform B protein.
Length = 1113
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 192 QRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
Q+ + D + VE +PHV+ HSS + E + S
Sbjct: 65 QQTQSVDQQPQSVEQQPHVKSEHSSPVHIKEELHQQQQQS 104
>AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA,
isoform A protein.
Length = 1113
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 192 QRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
Q+ + D + VE +PHV+ HSS + E + S
Sbjct: 65 QQTQSVDQQPQSVEQQPHVKSEHSSPVHIKEELHQQQQQS 104
>AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-PA,
isoform A protein.
Length = 1616
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 198 YPTEDDERDPVEARPHVREHHSSTPNFSEST 290
YPT DDE PVE P E + P +E+T
Sbjct: 741 YPTNDDELAPVEIEP---ELTTEEPEIAENT 768
>BT022140-1|AAY51535.1| 660|Drosophila melanogaster IP01538p
protein.
Length = 660
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 183 QREQRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRN 308
Q++QR T + R H H S+T N S S S+T +
Sbjct: 174 QQQQRQQTHHHATTGKQQRQHHNHHSSNTNNSSNSGNSNTNS 215
>AE014134-917|AAF52249.1| 660|Drosophila melanogaster CG6604-PA
protein.
Length = 660
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 183 QREQRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRN 308
Q++QR T + R H H S+T N S S S+T +
Sbjct: 174 QQQQRQQTHHHATTGKQQRQHHNHHSSNTNNSSNSGNSNTNS 215
>U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-like
protein protein.
Length = 158
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 254 LTYVGACFNGITLIILG 204
+ +G CFNG+TL+I G
Sbjct: 131 INLLGDCFNGLTLLIFG 147
>AY058698-1|AAL13927.1| 604|Drosophila melanogaster LD41750p
protein.
Length = 604
Score = 26.6 bits (56), Expect = 7.5
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 173 YE-MNKAQVDANLELARAKINEITAKVR-AAVPLGRRAEGDK-DK*TPLRA 30
YE + KA + EL RAK+NE T +R A + A G K D+ LRA
Sbjct: 193 YENLGKALPEDEQELYRAKVNEFTPNLRYCAYNISGGASGGKIDEILELRA 243
>AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog
protein.
Length = 1061
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 183 QREQRYPTEDDERDPVEARPHVREHHSSTPNFSESTXSSTRNS 311
QR Q P + + + + P V EH SST + S ++T S
Sbjct: 515 QRRQSLPFDPGQSNELLRTPRVEEHQSSTCSPSNLNVTATGKS 557
>AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA
protein.
Length = 154
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 254 LTYVGACFNGITLIILG 204
+ +G CFNG+TL+I G
Sbjct: 127 INLLGDCFNGLTLLIFG 143
>AE014296-1556|AAF50341.1| 604|Drosophila melanogaster CG5064-PA
protein.
Length = 604
Score = 26.6 bits (56), Expect = 7.5
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 173 YE-MNKAQVDANLELARAKINEITAKVR-AAVPLGRRAEGDK-DK*TPLRA 30
YE + KA + EL RAK+NE T +R A + A G K D+ LRA
Sbjct: 193 YENLGKALPEDEQELYRAKVNEFTPNLRYCAYNISGGASGGKIDEILELRA 243
>BT016107-1|AAV36992.1| 704|Drosophila melanogaster LD14822p
protein.
Length = 704
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 189 EQRYPTEDDERDPVEARPHVREH 257
E RY D R+PVE P R+H
Sbjct: 371 EARYLQNRDRREPVEQTPKERKH 393
>AF145688-1|AAD38663.1| 1420|Drosophila melanogaster BcDNA.LD26050
protein.
Length = 1420
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 173 YEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGDKD 51
+EMN +D L+ A + EI K A LG +GDK+
Sbjct: 504 HEMNYTTIDDKLDEAVKDVVEIEEKKAAEDELGVIPKGDKE 544
>AE014134-3367|AAF53982.1| 704|Drosophila melanogaster CG8679-PA
protein.
Length = 704
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 189 EQRYPTEDDERDPVEARPHVREH 257
E RY D R+PVE P R+H
Sbjct: 371 EARYLQNRDRREPVEQTPKERKH 393
>AE013599-1169|AAF58755.1| 1420|Drosophila melanogaster CG12340-PA
protein.
Length = 1420
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 173 YEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGDKD 51
+EMN +D L+ A + EI K A LG +GDK+
Sbjct: 504 HEMNYTTIDDKLDEAVKDVVEIEEKKAAEDELGVIPKGDKE 544
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,468,120
Number of Sequences: 53049
Number of extensions: 128027
Number of successful extensions: 630
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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