Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0883.Seq
(399 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 22 1.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 4.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 4.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 4.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 4.5
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 21 5.9
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 21 5.9
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 5.9
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 5.9
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 231 RAYSQTLHSATCECVERELHGRR 299
+A LHS +C E++ G R
Sbjct: 65 KALPDALHSGCSKCTEKQKEGSR 87
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 143 LMFINIAWSYFIVLI*NYYCLIII 72
++ INI SYF + + C I+I
Sbjct: 380 VLLINIFASYFAYIFGKFACKIMI 403
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 143 LMFINIAWSYFIVLI*NYYCLIII 72
++ INI SYF + + C I+I
Sbjct: 380 VLLINIFASYFAYIFGKFACKIMI 403
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 143 LMFINIAWSYFIVLI*NYYCLIII 72
++ INI SYF + + C I+I
Sbjct: 380 VLLINIFASYFAYIFGKFACKIMI 403
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 143 LMFINIAWSYFIVLI*NYYCLIII 72
++ INI SYF + + C I+I
Sbjct: 380 VLLINIFASYFAYIFGKFACKIMI 403
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 117 LFYCFNMKLLLSNYNCIS 64
L YCFN+ L S N +S
Sbjct: 284 LSYCFNLYHLASKSNQLS 301
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 117 LFYCFNMKLLLSNYNCIS 64
L YCFN+ L S N +S
Sbjct: 284 LSYCFNLYHLASKSNQLS 301
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 141 NVYKYSVVLFYCFNMKLLLSNYNCI 67
+++ +S +LF ++ LLL +C+
Sbjct: 276 DIFGWSFLLFTLYSSLLLLDYVSCV 300
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 141 NVYKYSVVLFYCFNMKLLLSNYNCI 67
+++ +S +LF ++ LLL +C+
Sbjct: 202 DIFGWSFLLFTLYSSLLLLDYVSCV 226
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,585
Number of Sequences: 336
Number of extensions: 1299
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8541369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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