Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0883.Seq
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF156779-1|AAD41896.1|  426|Homo sapiens ASB-4 protein protein.        29   5.7  
AC003079-1|AAB83943.2|  426|Homo sapiens unknown protein.              29   5.7  

>AF156779-1|AAD41896.1|  426|Homo sapiens ASB-4 protein protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 310 HPPLRLPCSSRSTHSHVALCSVCE*ARGVTSHCMRIMK--SLPLSLSRGLVYECEG 149
           H    + C+S  T  H++ C++    R + + C R +   SLPLSL + L+ E EG
Sbjct: 371 HSLFTVCCNSPRTLMHLSRCAI---RRTLHNRCHRAIPLLSLPLSLKKYLLLEPEG 423


>AC003079-1|AAB83943.2|  426|Homo sapiens unknown protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 310 HPPLRLPCSSRSTHSHVALCSVCE*ARGVTSHCMRIMK--SLPLSLSRGLVYECEG 149
           H    + C+S  T  H++ C++    R + + C R +   SLPLSL + L+ E EG
Sbjct: 371 HSLFTVCCNSPRTLMHLSRCAI---RRTLHNRCHRAIPLLSLPLSLKKYLLLEPEG 423


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,564,171
Number of Sequences: 237096
Number of extensions: 676518
Number of successful extensions: 4775
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4775
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)