Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0883.Seq
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029921-1|ABM92795.1| 1434|Drosophila melanogaster IP03663p pro...    29   3.0  
AE014297-2094|AAF55235.1| 1434|Drosophila melanogaster CG3158-PA...    29   3.0  
AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA...    27   7.0  
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    27   9.2  

>BT029921-1|ABM92795.1| 1434|Drosophila melanogaster IP03663p protein.
          Length = 1434

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 135  KH*LSPSHS*TRPRERERGRLFMMRMQCDVTP--RAYSQTLHSATCE 269
            K  + P HS T  +E + GRL  +R  C +    R +  TL   TC+
Sbjct: 1355 KRAIFPMHSLTELQEEDTGRLVQLRENCSMLHKWRNFEGTLPHMTCK 1401


>AE014297-2094|AAF55235.1| 1434|Drosophila melanogaster CG3158-PA
            protein.
          Length = 1434

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 135  KH*LSPSHS*TRPRERERGRLFMMRMQCDVTP--RAYSQTLHSATCE 269
            K  + P HS T  +E + GRL  +R  C +    R +  TL   TC+
Sbjct: 1355 KRAIFPMHSLTELQEEDTGRLVQLRENCSMLHKWRNFEGTLPHMTCK 1401


>AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA
           protein.
          Length = 1060

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 157 THRLDRARERGADFS*CACSATSRRALIHKHYTAQRVNVLNASY 288
           T R  +   R ADFS        R  L+H HY +QR+  L   Y
Sbjct: 796 TGREGKQAARCADFSIARFEMLRRLFLVHGHYNSQRLAFLVLFY 839


>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 316 T*HPPLRLPCSSRSTHSHVALCS 248
           T H  L  PC+SR+++SH+A  S
Sbjct: 304 TSHDSLATPCASRASNSHMATVS 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,250,088
Number of Sequences: 53049
Number of extensions: 228506
Number of successful extensions: 344
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)