BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0883.Seq (399 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT029921-1|ABM92795.1| 1434|Drosophila melanogaster IP03663p pro... 29 3.0 AE014297-2094|AAF55235.1| 1434|Drosophila melanogaster CG3158-PA... 29 3.0 AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA... 27 7.0 AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA... 27 9.2 >BT029921-1|ABM92795.1| 1434|Drosophila melanogaster IP03663p protein. Length = 1434 Score = 28.7 bits (61), Expect = 3.0 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +3 Query: 135 KH*LSPSHS*TRPRERERGRLFMMRMQCDVTP--RAYSQTLHSATCE 269 K + P HS T +E + GRL +R C + R + TL TC+ Sbjct: 1355 KRAIFPMHSLTELQEEDTGRLVQLRENCSMLHKWRNFEGTLPHMTCK 1401 >AE014297-2094|AAF55235.1| 1434|Drosophila melanogaster CG3158-PA protein. Length = 1434 Score = 28.7 bits (61), Expect = 3.0 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +3 Query: 135 KH*LSPSHS*TRPRERERGRLFMMRMQCDVTP--RAYSQTLHSATCE 269 K + P HS T +E + GRL +R C + R + TL TC+ Sbjct: 1355 KRAIFPMHSLTELQEEDTGRLVQLRENCSMLHKWRNFEGTLPHMTCK 1401 >AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA protein. Length = 1060 Score = 27.5 bits (58), Expect = 7.0 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 157 THRLDRARERGADFS*CACSATSRRALIHKHYTAQRVNVLNASY 288 T R + R ADFS R L+H HY +QR+ L Y Sbjct: 796 TGREGKQAARCADFSIARFEMLRRLFLVHGHYNSQRLAFLVLFY 839 >AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA protein. Length = 1218 Score = 27.1 bits (57), Expect = 9.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -3 Query: 316 T*HPPLRLPCSSRSTHSHVALCS 248 T H L PC+SR+++SH+A S Sbjct: 304 TSHDSLATPCASRASNSHMATVS 326 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,250,088 Number of Sequences: 53049 Number of extensions: 228506 Number of successful extensions: 344 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 344 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 344 length of database: 24,988,368 effective HSP length: 77 effective length of database: 20,903,595 effective search space used: 1149697725 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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