Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0881.Seq
         (329 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.    26   10.0 
BT012666-1|AAT08472.1|  943|Drosophila melanogaster RE64326p pro...    26   10.0 
AY069166-1|AAL39311.1|  393|Drosophila melanogaster GH20337p pro...    26   10.0 
AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA...    26   10.0 
AE014134-323|AAN10438.1|  393|Drosophila melanogaster CG4233-PC,...    26   10.0 
AE014134-322|AAN10437.1|  431|Drosophila melanogaster CG4233-PB,...    26   10.0 
AE014134-321|AAF51320.1|  424|Drosophila melanogaster CG4233-PA,...    26   10.0 

>DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.
          Length = 2765

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +3

Query: 108 LQGILQVVFSCIKHRYSYGDGKEYRICFRSKGIFFLDQACVKVCSRLNDTPGNTRRSG 281
           L  + QV   C        +   + ICF ++   F     ++ CS+ +    N+RR G
Sbjct: 315 LHPMQQVSMVCENKNCRSNEKSAFSICFSTECASFNGNHPIRYCSQCHSNRHNSRRGG 372


>BT012666-1|AAT08472.1|  943|Drosophila melanogaster RE64326p
           protein.
          Length = 943

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +3

Query: 108 LQGILQVVFSCIKHRYSYGDGKEYRICFRSKGIFFLDQACVKVCSRLNDTPGNTRRSG 281
           L  + QV   C        +   + ICF ++   F     ++ CS+ +    N+RR G
Sbjct: 326 LHPMQQVSMVCENKNCRSNEKSAFSICFSTECASFNGNHPIRYCSQCHSNRHNSRRGG 383


>AY069166-1|AAL39311.1|  393|Drosophila melanogaster GH20337p
           protein.
          Length = 393

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 230 YTSLVKEKYAFASKTYSIFLTISVRISVFNTTKHDLEY 117
           +T L  E+     K +S++LT   R+S+   T  ++EY
Sbjct: 346 FTGLKPEQVQKLIKDHSVYLTNDGRVSMAGVTSKNVEY 383


>AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA
           protein.
          Length = 2958

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +3

Query: 108 LQGILQVVFSCIKHRYSYGDGKEYRICFRSKGIFFLDQACVKVCSRLNDTPGNTRRSG 281
           L  + QV   C        +   + ICF ++   F     ++ CS+ +    N+RR G
Sbjct: 326 LHPMQQVSMVCENKNCRSNEKSAFSICFSTECASFNGNHPIRYCSQCHSNRHNSRRGG 383


>AE014134-323|AAN10438.1|  393|Drosophila melanogaster CG4233-PC,
           isoform C protein.
          Length = 393

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 230 YTSLVKEKYAFASKTYSIFLTISVRISVFNTTKHDLEY 117
           +T L  E+     K +S++LT   R+S+   T  ++EY
Sbjct: 346 FTGLKPEQVQKLIKDHSVYLTNDGRVSMAGVTSKNVEY 383


>AE014134-322|AAN10437.1|  431|Drosophila melanogaster CG4233-PB,
           isoform B protein.
          Length = 431

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 230 YTSLVKEKYAFASKTYSIFLTISVRISVFNTTKHDLEY 117
           +T L  E+     K +S++LT   R+S+   T  ++EY
Sbjct: 384 FTGLKPEQVQKLIKDHSVYLTNDGRVSMAGVTSKNVEY 421


>AE014134-321|AAF51320.1|  424|Drosophila melanogaster CG4233-PA,
           isoform A protein.
          Length = 424

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 230 YTSLVKEKYAFASKTYSIFLTISVRISVFNTTKHDLEY 117
           +T L  E+     K +S++LT   R+S+   T  ++EY
Sbjct: 377 FTGLKPEQVQKLIKDHSVYLTNDGRVSMAGVTSKNVEY 414


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,616,007
Number of Sequences: 53049
Number of extensions: 256019
Number of successful extensions: 516
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)