BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0881.Seq (329 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g40330.1 68415.m04972 Bet v I allergen family protein contain... 29 0.57 At5g02400.1 68418.m00163 protein phosphatase 2C family protein /... 28 1.3 At5g07810.1 68418.m00895 SNF2 domain-containing protein / helica... 28 1.7 At2g15910.1 68415.m01823 CSL zinc finger domain-containing prote... 27 2.3 At3g09400.1 68416.m01116 protein phosphatase 2C family protein /... 27 3.0 At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 27 4.0 At2g25530.1 68415.m03056 AFG1-like ATPase family protein contain... 27 4.0 At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 26 7.0 At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 26 7.0 At5g24970.1 68418.m02957 ABC1 family protein contains Pfam domai... 25 9.3 At1g13900.1 68414.m01631 calcineurin-like phosphoesterase family... 25 9.3 >At2g40330.1 68415.m04972 Bet v I allergen family protein contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family Length = 215 Score = 29.5 bits (63), Expect = 0.57 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +1 Query: 82 LSKI*NLKHYKEYSKSCLVVLNTDILTEMVRNIEYVFEAKAYFSLTRL 225 LS+ + + YK + KSC VV+ VR + V A FSL RL Sbjct: 80 LSRFEHPQAYKHFVKSCHVVIGDGREVGSVREVRVVSGLPAAFSLERL 127 >At5g02400.1 68418.m00163 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain Length = 674 Score = 28.3 bits (60), Expect = 1.3 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = +1 Query: 97 NLKHYKEYSKSCLVVLNTDILTEMVRNIEYVFEAKAYFS 213 +L H+K S+ ++L++D L E N E +FE +++ S Sbjct: 575 SLCHHKLTSRDKFLILSSDGLYEYFSNQEAIFEVESFIS 613 >At5g07810.1 68418.m00895 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein similar to HepA-related protein HARP [Homo sapiens] GI:6693791; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF01844: HNH endonuclease Length = 1190 Score = 27.9 bits (59), Expect = 1.7 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -2 Query: 247 RREQTFTQAWSRKNMPLLR 191 R+E+ +TQAWS N PL + Sbjct: 966 RKEKEYTQAWSMSNEPLCK 984 >At2g15910.1 68415.m01823 CSL zinc finger domain-containing protein contains Pfam PF05207: CSL zinc finger domain Length = 367 Score = 27.5 bits (58), Expect = 2.3 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +3 Query: 138 CIKHRYSYGDGKEYRICFRSKGIFFLDQACVKVC 239 C + S GDG I SK FFLDQ + C Sbjct: 152 CSDTQISKGDGFTIGIAISSKEAFFLDQVQLSPC 185 >At3g09400.1 68416.m01116 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase-2c (GI:3608412) [Mesembryanthemum crystallinum]; contains Pfam PF00481 : Protein phosphatase 2C domain Length = 650 Score = 27.1 bits (57), Expect = 3.0 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = +1 Query: 97 NLKHYKEYSKSCLVVLNTDILTEMVRNIEYVFEAKAYFS 213 +L H++ S+ ++L++D L E N E +FE ++ S Sbjct: 551 SLHHHRLSSRDKFLILSSDGLYEYFSNEEAIFEVDSFIS 589 >At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain Length = 1055 Score = 26.6 bits (56), Expect = 4.0 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +3 Query: 138 CIKHRYSYGDGKEYRICFRSKGIFFLD 218 C+ H+ YG+ E + FR+ +F D Sbjct: 956 CMIHKLGYGNWDELKAAFRTSSVFRFD 982 >At2g25530.1 68415.m03056 AFG1-like ATPase family protein contains Pfam profile: PF03969 AFG1-like ATPase Length = 655 Score = 26.6 bits (56), Expect = 4.0 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -3 Query: 237 RLLHKPGQGKICLCFENIFDIPYHLRKNI 151 RL H P Q K+ FEN+F H K + Sbjct: 124 RLQHDPYQEKVVSAFENLFGRLEHFEKQM 152 >At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain Length = 1072 Score = 25.8 bits (54), Expect = 7.0 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +3 Query: 138 CIKHRYSYGDGKEYRICFRSKGIFFLD 218 C+ H+ YG+ E + FR+ +F D Sbjct: 962 CMVHKLGYGNWDELKAAFRTSPLFRFD 988 >At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain Length = 1069 Score = 25.8 bits (54), Expect = 7.0 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +3 Query: 138 CIKHRYSYGDGKEYRICFRSKGIFFLD 218 C+ H+ YG+ E + FR+ +F D Sbjct: 962 CMVHKLGYGNWDELKAAFRTSPLFRFD 988 >At5g24970.1 68418.m02957 ABC1 family protein contains Pfam domain, PF03109: ABC1 family Length = 719 Score = 25.4 bits (53), Expect = 9.3 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 100 LKHYKEYSKSCLVVLNTDILTEMVRNIEYVFEAK 201 LK + + K LV +N +++ M I+YV EAK Sbjct: 255 LKRFAKARKDLLVAVN-EMVRHMFDEIDYVLEAK 287 >At1g13900.1 68414.m01631 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase Length = 656 Score = 25.4 bits (53), Expect = 9.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 5 YKTGAFYVC*LKLNKEKVIVKIVRSH 82 Y+TG F L NKEK+ V V +H Sbjct: 542 YRTGEFGYTRLVANKEKLTVSFVGNH 567 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,656,107 Number of Sequences: 28952 Number of extensions: 124985 Number of successful extensions: 258 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 258 length of database: 12,070,560 effective HSP length: 71 effective length of database: 10,014,968 effective search space used: 380568784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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