Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0880.Seq
         (419 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   2.0  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   2.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   3.4  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   3.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   4.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   4.5  
AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    22   7.9  
AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding pr...    22   7.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 117  YNHKGEVLISRVYRDDIGRN 176
            YNH  E ++  V+ + IGRN
Sbjct: 1710 YNHVAESILHAVHDEPIGRN 1729


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 295 SHKAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNN 405
           S   +CE    F+  LKI   + S+  ++ E N+  N
Sbjct: 205 SENDQCEPTYGFKHRLKITRDIDSFIAQVKESNVTGN 241


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 177 HYDQYHLGRLSRSTPRLYGCKRTSLRSL 94
           HY Q+H           Y C RT ++SL
Sbjct: 762 HYAQHHFNSQGSRKAEPYYCDRTLVQSL 789


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 222 VRSPVTNIARTLSSISSVQIFGWQQS 299
           +RS + N+  + SSI+++Q+  WQ S
Sbjct: 338 IRSAIGNVTGSASSIATIQL--WQLS 361


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 51  ITLKPILKECEASPTMIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAF-RVNVIHA 212
           ITL+  +  C  S  ++       H   +L+S +YR   + G  AVD+  RV V+ A
Sbjct: 3   ITLQINISNCSTSQNLMLQAAKEQHADVILVSELYRHPPNNGNWAVDSSGRVAVVAA 59


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 69  LKECEASPTMIGGLFVYNHKGEV-LISRVYRDDIGRN 176
           L  CE    M+G L +   KG+V ++S  YR   G N
Sbjct: 8   LNHCEEVQDMLGQLLI-EEKGDVAMLSEPYRCPSGVN 43


>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 215 ASMDHIHSECVHSIT 171
           A++DH+  EC H +T
Sbjct: 109 AAVDHLTRECSHIVT 123


>AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 215 ASMDHIHSECVHSIT 171
           A++DH+  EC H +T
Sbjct: 109 AAVDHLTRECSHIVT 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,382
Number of Sequences: 2352
Number of extensions: 8793
Number of successful extensions: 51
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)