BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0880.Seq (419 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 2.0 AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 24 2.0 EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 3.4 AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 23 3.4 AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 4.5 AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 4.5 AY146742-1|AAO12102.1| 154|Anopheles gambiae odorant-binding pr... 22 7.9 AF437890-1|AAL84185.1| 154|Anopheles gambiae odorant binding pr... 22 7.9 >EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium channel alpha1 subunit protein. Length = 1893 Score = 24.2 bits (50), Expect = 2.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +3 Query: 117 YNHKGEVLISRVYRDDIGRN 176 YNH E ++ V+ + IGRN Sbjct: 1710 YNHVAESILHAVHDEPIGRN 1729 >AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin subunit AgBnu protein. Length = 803 Score = 24.2 bits (50), Expect = 2.0 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +1 Query: 295 SHKAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNN 405 S +CE F+ LKI + S+ ++ E N+ N Sbjct: 205 SENDQCEPTYGFKHRLKITRDIDSFIAQVKESNVTGN 241 >EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium channel alpha2-delta subunit 1 protein. Length = 1256 Score = 23.4 bits (48), Expect = 3.4 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -3 Query: 177 HYDQYHLGRLSRSTPRLYGCKRTSLRSL 94 HY Q+H Y C RT ++SL Sbjct: 762 HYAQHHFNSQGSRKAEPYYCDRTLVQSL 789 >AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein protein. Length = 468 Score = 23.4 bits (48), Expect = 3.4 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = +3 Query: 222 VRSPVTNIARTLSSISSVQIFGWQQS 299 +RS + N+ + SSI+++Q+ WQ S Sbjct: 338 IRSAIGNVTGSASSIATIQL--WQLS 361 >AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase protein. Length = 1173 Score = 23.0 bits (47), Expect = 4.5 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +3 Query: 51 ITLKPILKECEASPTMIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAF-RVNVIHA 212 ITL+ + C S ++ H +L+S +YR + G AVD+ RV V+ A Sbjct: 3 ITLQINISNCSTSQNLMLQAAKEQHADVILVSELYRHPPNNGNWAVDSSGRVAVVAA 59 >AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase protein. Length = 973 Score = 23.0 bits (47), Expect = 4.5 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +3 Query: 69 LKECEASPTMIGGLFVYNHKGEV-LISRVYRDDIGRN 176 L CE M+G L + KG+V ++S YR G N Sbjct: 8 LNHCEEVQDMLGQLLI-EEKGDVAMLSEPYRCPSGVN 43 >AY146742-1|AAO12102.1| 154|Anopheles gambiae odorant-binding protein AgamOBP7 protein. Length = 154 Score = 22.2 bits (45), Expect = 7.9 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = -1 Query: 215 ASMDHIHSECVHSIT 171 A++DH+ EC H +T Sbjct: 109 AAVDHLTRECSHIVT 123 >AF437890-1|AAL84185.1| 154|Anopheles gambiae odorant binding protein protein. Length = 154 Score = 22.2 bits (45), Expect = 7.9 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = -1 Query: 215 ASMDHIHSECVHSIT 171 A++DH+ EC H +T Sbjct: 109 AAVDHLTRECSHIVT 123 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 441,382 Number of Sequences: 2352 Number of extensions: 8793 Number of successful extensions: 51 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 51 length of database: 563,979 effective HSP length: 58 effective length of database: 427,563 effective search space used: 34632603 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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