Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0880.Seq
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070712-1|AAL48183.1|  437|Drosophila melanogaster SD05403p pro...   112   2e-25
AJ005962-1|CAA06785.1|  437|Drosophila melanogaster clathrin-ass...   112   2e-25
AF110232-1|AAF14248.1|  437|Drosophila melanogaster clathrin-ass...   112   2e-25
AE014297-3160|AAF56002.3|  437|Drosophila melanogaster CG7057-PB...   112   2e-25
AE014297-3159|AAF56001.1|  437|Drosophila melanogaster CG7057-PA...   112   2e-25
AY113430-1|AAM29435.1|  510|Drosophila melanogaster RE24941p pro...    32   0.27 
AE014297-1596|AAG22150.1|  510|Drosophila melanogaster CG7241-PA...    32   0.27 
AE014297-186|AAN13261.1|  654|Drosophila melanogaster CG31537-PA...    31   0.62 
AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p pro...    31   0.83 
AJ006219-1|CAA06918.1|  426|Drosophila melanogaster clathrin-ass...    31   0.83 
AF110231-1|AAF14247.1|  426|Drosophila melanogaster clathrin-ass...    31   0.83 
AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA ...    31   0.83 
AY069388-1|AAL39533.1|  415|Drosophila melanogaster LD09732p pro...    29   1.9  
AJ009657-1|CAA08768.1|  415|Drosophila melanogaster Mu3 subunit ...    29   1.9  
AF110233-1|AAF14249.1|  415|Drosophila melanogaster clathrin-ass...    29   1.9  
AE014298-989|AAF46231.1|  415|Drosophila melanogaster CG3035-PA ...    29   1.9  
BT025121-1|ABE73292.1|  292|Drosophila melanogaster IP09335p pro...    29   2.5  
AF521597-1|AAN62853.1|  256|Drosophila melanogaster MSP-300 prot...    29   2.5  
AE014298-1479|AAF46613.1|  292|Drosophila melanogaster CG12637-P...    29   2.5  
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   2.5  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   2.5  
AE014134-2651|AAN10921.1|  427|Drosophila melanogaster CG31823-P...    28   5.8  
AY118283-1|AAM48312.1| 1527|Drosophila melanogaster AT14886p pro...    27   7.7  
AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-P...    27   7.7  

>AY070712-1|AAL48183.1|  437|Drosophila melanogaster SD05403p
           protein.
          Length = 437

 Score =  112 bits (269), Expect = 2e-25
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 96  MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 53



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +1

Query: 301 KAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           K      MVFE LLKII+VM SYFGKISEENI NNFV
Sbjct: 70  KQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFV 106



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 254 TFFHIKRANIWLAAVTKQNVNAA 322
           +FFHIKRANIWLAAVTKQNVNAA
Sbjct: 54  SFFHIKRANIWLAAVTKQNVNAA 76


>AJ005962-1|CAA06785.1|  437|Drosophila melanogaster
           clathrin-associated protein protein.
          Length = 437

 Score =  112 bits (269), Expect = 2e-25
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 96  MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 53



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +1

Query: 301 KAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           K      MVFE LLKII+VM SYFGKISEENI NNFV
Sbjct: 70  KQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFV 106



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 254 TFFHIKRANIWLAAVTKQNVNAA 322
           +FFHIKRANIWLAAVTKQNVNAA
Sbjct: 54  SFFHIKRANIWLAAVTKQNVNAA 76


>AF110232-1|AAF14248.1|  437|Drosophila melanogaster
           clathrin-associated adaptor complexAP-2 medium chain
           protein.
          Length = 437

 Score =  112 bits (269), Expect = 2e-25
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 96  MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 53



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +1

Query: 301 KAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           K      MVFE LLKII+VM SYFGKISEENI NNFV
Sbjct: 70  KQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFV 106



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 254 TFFHIKRANIWLAAVTKQNVNAA 322
           +FFHIKRANIWLAAVTKQNVNAA
Sbjct: 54  SFFHIKRANIWLAAVTKQNVNAA 76


>AE014297-3160|AAF56002.3|  437|Drosophila melanogaster CG7057-PB,
           isoform B protein.
          Length = 437

 Score =  112 bits (269), Expect = 2e-25
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 96  MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 53



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +1

Query: 301 KAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           K      MVFE LLKII+VM SYFGKISEENI NNFV
Sbjct: 70  KQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFV 106



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 254 TFFHIKRANIWLAAVTKQNVNAA 322
           +FFHIKRANIWLAAVTKQNVNAA
Sbjct: 54  SFFHIKRANIWLAAVTKQNVNAA 76


>AE014297-3159|AAF56001.1|  437|Drosophila melanogaster CG7057-PA,
           isoform A protein.
          Length = 437

 Score =  112 bits (269), Expect = 2e-25
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 96  MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIART 53



 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +1

Query: 301 KAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           K      MVFE LLKII+VM SYFGKISEENI NNFV
Sbjct: 70  KQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFV 106



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +2

Query: 254 TFFHIKRANIWLAAVTKQNVNAA 322
           +FFHIKRANIWLAAVTKQNVNAA
Sbjct: 54  SFFHIKRANIWLAAVTKQNVNAA 76


>AY113430-1|AAM29435.1|  510|Drosophila melanogaster RE24941p
           protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 111 FVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTN 242
           F Y HK  + +SR Y+ DI    V  F V V+H+   VR  + N
Sbjct: 50  FKYLHKAALTLSRWYKSDIIGLHVGPFPVAVVHSADGVREILNN 93


>AE014297-1596|AAG22150.1|  510|Drosophila melanogaster CG7241-PA
           protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 111 FVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTN 242
           F Y HK  + +SR Y+ DI    V  F V V+H+   VR  + N
Sbjct: 50  FKYLHKAALTLSRWYKSDIIGLHVGPFPVAVVHSADGVREILNN 93


>AE014297-186|AAN13261.1|  654|Drosophila melanogaster CG31537-PA
           protein.
          Length = 654

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 26/99 (26%), Positives = 45/99 (45%)
 Frame = -2

Query: 415 IRQSYS*CSLQKSCQNTXASHQ*SSTXTQIPCRVHILLCDCCQPNICTLDMEESVRAMLV 236
           +RQ++S C  Q    NT  SH+ S   T  P  V I +     P++C ++   +    + 
Sbjct: 258 LRQNHSPCQRQL---NTQRSHKRSGVGTAAPI-VSIQV-----PSVCEIESSSTRSPTVN 308

Query: 235 TGDRTCWRAWITFTLNASTALRPISSR*TLEINTSPLWL 119
           T +R C           ST ++  S R + ++N +P +L
Sbjct: 309 TSNRYCASTTFQTKTIPSTTMKANSRRASSQVNLNPRFL 347


>AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p
           protein.
          Length = 426

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 MVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           +VF  L KI  V   YF ++ EE+I +NFV
Sbjct: 82  LVFVFLHKIAQVFVEYFKELEEESIRDNFV 111



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 108 LFVYNHKGEVLISRVYR-DDIGRNAVDAFRVNVIHARQQ-VRSPVTNIART 254
           +FV + KG+VLISR YR D+I    +D F   ++   ++ + +P+   A T
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAET 56


>AJ006219-1|CAA06918.1|  426|Drosophila melanogaster
           clathrin-associated protein protein.
          Length = 426

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 MVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           +VF  L KI  V   YF ++ EE+I +NFV
Sbjct: 82  LVFVFLHKIAQVFVEYFKELEEESIRDNFV 111



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 108 LFVYNHKGEVLISRVYR-DDIGRNAVDAFRVNVIHARQQ-VRSPVTNIART 254
           +FV + KG+VLISR YR D+I    +D F   ++   ++ + +P+   A T
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAET 56


>AF110231-1|AAF14247.1|  426|Drosophila melanogaster
           clathrin-associated adaptor complexAP-1 medium chain
           protein.
          Length = 426

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 MVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           +VF  L KI  V   YF ++ EE+I +NFV
Sbjct: 82  LVFVFLHKIAQVFVEYFKELEEESIRDNFV 111



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 108 LFVYNHKGEVLISRVYR-DDIGRNAVDAFRVNVIHARQQ-VRSPVTNIART 254
           +FV + KG+VLISR YR D+I    +D F   ++   ++ + +P+   A T
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAET 56


>AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA
           protein.
          Length = 426

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 MVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           +VF  L KI  V   YF ++ EE+I +NFV
Sbjct: 82  LVFVFLHKIAQVFVEYFKELEEESIRDNFV 111



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 108 LFVYNHKGEVLISRVYR-DDIGRNAVDAFRVNVIHARQQ-VRSPVTNIART 254
           +FV + KG+VLISR YR D+I    +D F   ++   ++ + +P+   A T
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAET 56


>AY069388-1|AAL39533.1|  415|Drosophila melanogaster LD09732p
           protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +1

Query: 232 LLPTLHAHFLPYQACKYLAGSSHKAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           ++ T H + +  Q       ++ K +     V E L +++D    YFG  SE  I +N+V
Sbjct: 46  VIATPHYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYV 105


>AJ009657-1|CAA08768.1|  415|Drosophila melanogaster Mu3 subunit of
           clathrin-associatedprotein complex AP-3 protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +1

Query: 232 LLPTLHAHFLPYQACKYLAGSSHKAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           ++ T H + +  Q       ++ K +     V E L +++D    YFG  SE  I +N+V
Sbjct: 46  VIATPHYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYV 105


>AF110233-1|AAF14249.1|  415|Drosophila melanogaster
           clathrin-associated adaptor complexAP-3 medium chain
           protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +1

Query: 232 LLPTLHAHFLPYQACKYLAGSSHKAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           ++ T H + +  Q       ++ K +     V E L +++D    YFG  SE  I +N+V
Sbjct: 46  VIATPHYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYV 105


>AE014298-989|AAF46231.1|  415|Drosophila melanogaster CG3035-PA
           protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +1

Query: 232 LLPTLHAHFLPYQACKYLAGSSHKAKCERGMVFEXLLKIIDVMXSYFGKISEENIMNNFV 411
           ++ T H + +  Q       ++ K +     V E L +++D    YFG  SE  I +N+V
Sbjct: 46  VIATPHYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYV 105


>BT025121-1|ABE73292.1|  292|Drosophila melanogaster IP09335p
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 103 PIIVGEASHSFKIGFNVIAIQRLHPFRNLT 14
           P+IV E  HSF  G    ++  LH FRN T
Sbjct: 125 PVIVCEFDHSFFGGSRPSSVVTLHTFRNAT 154


>AF521597-1|AAN62853.1|  256|Drosophila melanogaster MSP-300
           protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 199 FTLNASTALRPISSR*TLEINTSPLWL*TNKPPIIVG 89
           F  NA+TAL+ ++S+    +N +P  L   +PP+++G
Sbjct: 65  FLSNANTALQFLASKRIKLVNINPADLVDGRPPVVLG 101


>AE014298-1479|AAF46613.1|  292|Drosophila melanogaster CG12637-PA
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 103 PIIVGEASHSFKIGFNVIAIQRLHPFRNLT 14
           P+IV E  HSF  G    ++  LH FRN T
Sbjct: 125 PVIVCEFDHSFFGGSRPSSVVTLHTFRNAT 154


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
           isoform B protein.
          Length = 7744

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 199 FTLNASTALRPISSR*TLEINTSPLWL*TNKPPIIVG 89
           F  NA+TAL+ ++S+    +N +P  L   +PP+++G
Sbjct: 65  FLSNANTALQFLASKRIKLVNINPADLVDGRPPVVLG 101


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
           isoform D protein.
          Length = 11707

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 199 FTLNASTALRPISSR*TLEINTSPLWL*TNKPPIIVG 89
           F  NA+TAL+ ++S+    +N +P  L   +PP+++G
Sbjct: 65  FLSNANTALQFLASKRIKLVNINPADLVDGRPPVVLG 101


>AE014134-2651|AAN10921.1|  427|Drosophila melanogaster CG31823-PA
           protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +3

Query: 102 GGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPV 236
           GG+F+YN +  V +  VYR        D  R NV  A      PV
Sbjct: 262 GGVFIYNTQRRVHVDEVYRYGEDPQMSDFMRSNVTKALGLGNMPV 306


>AY118283-1|AAM48312.1| 1527|Drosophila melanogaster AT14886p
           protein.
          Length = 1527

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 189 FRVNVIHARQQVRSPVTNIARTLSSISSV 275
           F V  IHA Q++R  +   A TLS  SSV
Sbjct: 217 FYVQGIHAAQRLREELDTFAHTLSDSSSV 245


>AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-PA
           protein.
          Length = 1602

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 189 FRVNVIHARQQVRSPVTNIARTLSSISSV 275
           F V  IHA Q++R  +   A TLS  SSV
Sbjct: 292 FYVQGIHAAQRLREELDTFAHTLSDSSSV 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,509,377
Number of Sequences: 53049
Number of extensions: 375333
Number of successful extensions: 972
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)