Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0878.Seq
         (329 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   4.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   7.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -2

Query: 223  PGHSNELYRCLIPSCANNFCIDNTVW 146
            P + N  YRC++      +C     W
Sbjct: 1112 PHNCNAYYRCVLGELRKQYCAGGLHW 1137


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 147 HTVLSIQKLFAQLGIR--HL*SSLLC 218
           H+VL I++ F  LGI   ++  +L+C
Sbjct: 166 HSVLPIKRFFTSLGIAFDNIMKNLIC 191


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
 Frame = +2

Query: 149 YGIIDTKIICAT----WNKTPVEFIAVSGPPYTE 238
           YGI   +  C      WN T  E + + G  Y E
Sbjct: 103 YGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNE 136


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 11/43 (25%), Positives = 16/43 (37%)
 Frame = +2

Query: 29  ENHRSENDTVDVGDINEFEASGYSTVMGVRGDIVDHHKKPYGI 157
           +NH     + D  D N  E     T  G R D +    +P  +
Sbjct: 299 DNHTLSVISTDGSDFNATEVDSLVTYAGERFDFIVTADQPQDV 341


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 219 PGRLTQKS 242
           PGR+TQKS
Sbjct: 777 PGRITQKS 784


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 115 NSHYC*IPTCFKLINVTN 62
           N H C IP C K+   T+
Sbjct: 313 NIHSCHIPGCGKVYGKTS 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,131
Number of Sequences: 336
Number of extensions: 1424
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)