Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0878.Seq
         (329 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    26   0.32 
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    25   0.74 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    21   9.1  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -2

Query: 235 CVRRPGHSNELYRCLIPSCANNFCIDNTV 149
           CV R    NE+Y C  P C    CI   V
Sbjct: 21  CVHRRCPKNEVYSCCAP-CPQKACISEAV 48


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 128 VDHHKKPYGIIDTKII-CATWNKTPVEF 208
           +DHH K YG +  K+  C  ++K  + F
Sbjct: 251 IDHHSKVYGTMYAKVTECVLFHKDILSF 278


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 281 WHRFTQRNLIINRP 322
           W+RFTQ   + N+P
Sbjct: 363 WNRFTQSTAMHNQP 376


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,586
Number of Sequences: 2352
Number of extensions: 6445
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)