BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0878.Seq (329 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC029579-1|AAH29579.1| 434|Homo sapiens F-box protein 15 protein. 29 2.6 BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein. 29 4.6 BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein. 29 4.6 BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein. 29 4.6 BC130547-1|AAI30548.1| 161|Homo sapiens GIY-YIG domain containi... 28 6.0 BC130545-1|AAI30546.1| 161|Homo sapiens GIY-YIG domain containi... 28 6.0 BC069007-1|AAH69007.1| 161|Homo sapiens GIY-YIG domain containi... 28 6.0 BC019306-1|AAH19306.1| 275|Homo sapiens GIY-YIG domain containi... 28 6.0 BC015990-1|AAH15990.1| 275|Homo sapiens GIY-YIG domain containi... 28 6.0 BC000803-1|AAH00803.1| 275|Homo sapiens GIY-YIG domain containi... 28 6.0 BC000754-1|AAH00754.1| 275|Homo sapiens GIY-YIG domain containi... 28 6.0 M22299-1|AAB02844.1| 570|Homo sapiens T-plastin polypeptide pro... 28 8.0 BC056898-1|AAH56898.1| 630|Homo sapiens plastin 3 (T isoform) p... 28 8.0 BC039049-1|AAH39049.1| 630|Homo sapiens plastin 3 (T isoform) p... 28 8.0 BC035579-1|AAH35579.1| 542|Homo sapiens zinc finger protein 100... 28 8.0 BC031248-1|AAH31248.1| 596|Homo sapiens ZNF100 protein protein. 28 8.0 BC008588-1|AAH08588.1| 409|Homo sapiens Similar to plastin 3 (T... 28 8.0 AL589842-1|CAI39884.1| 627|Homo sapiens plastin 3 (T isoform) p... 28 8.0 AK222801-1|BAD96521.1| 630|Homo sapiens plastin 3 variant protein. 28 8.0 >BC029579-1|AAH29579.1| 434|Homo sapiens F-box protein 15 protein. Length = 434 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +2 Query: 125 IVDHHKKPYGIIDTKIICATWNKTPVEFIAVSGPPYTEVQANAKSFESTKGIWHRFTQRN 304 ++D H KP+ + + C TP + + G Y +A+ + +W R T+ Sbjct: 354 LLDEHGKPFWCFSSPV-CLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELVWIRETEEY 412 Query: 305 LIIN 316 LI+N Sbjct: 413 LIVN 416 >BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein. Length = 711 Score = 28.7 bits (61), Expect = 4.6 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +2 Query: 140 KKPYGIIDTKIICATWNKTPVE 205 +KP+GI+ ++C+ K+PVE Sbjct: 59 RKPFGILSPNVLCSMSGKSPVE 80 >BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein. Length = 711 Score = 28.7 bits (61), Expect = 4.6 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +2 Query: 140 KKPYGIIDTKIICATWNKTPVE 205 +KP+GI+ ++C+ K+PVE Sbjct: 59 RKPFGILSPNVLCSMSGKSPVE 80 >BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein. Length = 711 Score = 28.7 bits (61), Expect = 4.6 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +2 Query: 140 KKPYGIIDTKIICATWNKTPVE 205 +KP+GI+ ++C+ K+PVE Sbjct: 59 RKPFGILSPNVLCSMSGKSPVE 80 >BC130547-1|AAI30548.1| 161|Homo sapiens GIY-YIG domain containing 2 protein. Length = 161 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 81 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 138 Query: 136 M 134 M Sbjct: 139 M 139 >BC130545-1|AAI30546.1| 161|Homo sapiens GIY-YIG domain containing 2 protein. Length = 161 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 81 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 138 Query: 136 M 134 M Sbjct: 139 M 139 >BC069007-1|AAH69007.1| 161|Homo sapiens GIY-YIG domain containing 2 protein. Length = 161 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 81 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 138 Query: 136 M 134 M Sbjct: 139 M 139 >BC019306-1|AAH19306.1| 275|Homo sapiens GIY-YIG domain containing 2 protein. Length = 275 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 195 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 252 Query: 136 M 134 M Sbjct: 253 M 253 >BC015990-1|AAH15990.1| 275|Homo sapiens GIY-YIG domain containing 2 protein. Length = 275 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 195 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 252 Query: 136 M 134 M Sbjct: 253 M 253 >BC000803-1|AAH00803.1| 275|Homo sapiens GIY-YIG domain containing 2 protein. Length = 275 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 195 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 252 Query: 136 M 134 M Sbjct: 253 M 253 >BC000754-1|AAH00754.1| 275|Homo sapiens GIY-YIG domain containing 2 protein. Length = 275 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 313 DYQIPLCKSVPDSLC*FEALCISLDFCVRRPGHSNELY-RCLIPSCANNFCIDNTVWLLM 137 D + PLC P L +C++ +F PG L +C P C + + +WL Sbjct: 195 DEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQC--PCCEKSLLWGDLIWLCQ 252 Query: 136 M 134 M Sbjct: 253 M 253 >M22299-1|AAB02844.1| 570|Homo sapiens T-plastin polypeptide protein. Length = 570 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 191 KTPVEFIAVSGPPYTEVQANAKSFES 268 K PV++ V+ PPY ++ AN K E+ Sbjct: 377 KVPVDWSKVNKPPYPKLGANMKKLEN 402 >BC056898-1|AAH56898.1| 630|Homo sapiens plastin 3 (T isoform) protein. Length = 630 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 191 KTPVEFIAVSGPPYTEVQANAKSFES 268 K PV++ V+ PPY ++ AN K E+ Sbjct: 437 KVPVDWSKVNKPPYPKLGANMKKLEN 462 >BC039049-1|AAH39049.1| 630|Homo sapiens plastin 3 (T isoform) protein. Length = 630 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 191 KTPVEFIAVSGPPYTEVQANAKSFES 268 K PV++ V+ PPY ++ AN K E+ Sbjct: 437 KVPVDWSKVNKPPYPKLGANMKKLEN 462 >BC035579-1|AAH35579.1| 542|Homo sapiens zinc finger protein 100 protein. Length = 542 Score = 27.9 bits (59), Expect = 8.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 253 CISLDFCVRRPGHSNELYRCLIPSCANNFCID 158 C S+D C H N+L +CLI + +N F D Sbjct: 149 CKSVDECKVHKEHDNKLNQCLITTQSNIFQCD 180 >BC031248-1|AAH31248.1| 596|Homo sapiens ZNF100 protein protein. Length = 596 Score = 27.9 bits (59), Expect = 8.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 253 CISLDFCVRRPGHSNELYRCLIPSCANNFCID 158 C S+D C H N+L +CLI + +N F D Sbjct: 203 CKSVDECKVHKEHDNKLNQCLITTQSNIFQCD 234 >BC008588-1|AAH08588.1| 409|Homo sapiens Similar to plastin 3 (T isoform) protein. Length = 409 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 191 KTPVEFIAVSGPPYTEVQANAKSFES 268 K PV++ V+ PPY ++ AN K E+ Sbjct: 216 KVPVDWSKVNKPPYPKLGANMKKLEN 241 >AL589842-1|CAI39884.1| 627|Homo sapiens plastin 3 (T isoform) protein. Length = 627 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 191 KTPVEFIAVSGPPYTEVQANAKSFES 268 K PV++ V+ PPY ++ AN K E+ Sbjct: 434 KVPVDWSKVNKPPYPKLGANMKKLEN 459 >AK222801-1|BAD96521.1| 630|Homo sapiens plastin 3 variant protein. Length = 630 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 191 KTPVEFIAVSGPPYTEVQANAKSFES 268 K PV++ V+ PPY ++ AN K E+ Sbjct: 437 KVPVDWSKVNKPPYPKLGANMKKLEN 462 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 44,267,400 Number of Sequences: 237096 Number of extensions: 823765 Number of successful extensions: 1746 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1743 length of database: 76,859,062 effective HSP length: 79 effective length of database: 58,128,478 effective search space used: 1743854340 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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