Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0873.Seq
         (269 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.25 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    19   7.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    19   9.5  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.25
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 45  YGWHIYVVDVYSF 7
           +GWH Y+ DV +F
Sbjct: 155 FGWHTYIFDVPNF 167


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 45  YGWHIYVVDVY 13
           Y WH Y+ D++
Sbjct: 400 YRWHSYIDDIF 410


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 73  LKGGAAVVTIWVAHLCCRC 17
           + G   + T+W+  L  RC
Sbjct: 726 VSGLVYIATVWICTLMNRC 744


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 62  PALQTETHYCFTAEIGRGRWYLP 130
           P  + +   C  A +G G +YLP
Sbjct: 38  PPPEEDNRGC-AASVGEGSFYLP 59


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 145 EVLPPVKSIILILFXFLCNNTK 210
           EVL P+ +++ I+  F   NT+
Sbjct: 62  EVLKPIYALMRIVGIFPIKNTE 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,800
Number of Sequences: 336
Number of extensions: 1084
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4485306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)