Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0873.Seq
         (269 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55777-1|CAA39296.1|  467|Homo sapiens protein ( H.sapiens Mahla...    29   2.7  
BC038105-1|AAH38105.1|  576|Homo sapiens MPP7 protein protein.         29   3.5  
AL391423-2|CAI17344.1|  312|Homo sapiens novel protein protein.        29   3.5  
AL391423-1|CAI17345.1|  576|Homo sapiens novel protein protein.        29   3.5  
AL390866-3|CAI12709.1|  312|Homo sapiens novel protein protein.        29   3.5  
AL390866-2|CAI12708.1|  576|Homo sapiens novel protein protein.        29   3.5  
AL355501-2|CAI13640.1|  312|Homo sapiens novel protein protein.        29   3.5  
AL355501-1|CAI13641.1|  576|Homo sapiens novel protein protein.        29   3.5  
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.                29   3.5  
D86975-1|BAA13211.2| 1204|Homo sapiens KIAA0222 protein.               28   4.6  
BC108287-1|AAI08288.1|  516|Homo sapiens ZNF516 protein protein.       28   4.6  
AK122601-1|BAC85488.1|  178|Homo sapiens protein ( Homo sapiens ...    28   4.6  

>X55777-1|CAA39296.1|  467|Homo sapiens protein ( H.sapiens Mahlavu
           hepatocellular carcinoma hhc(M) DNA. ).
          Length = 467

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 167 DFTGGRTSCESARVGTTAPCLFLP*SSNAFRFEG-RGSRCNY 45
           D    + SC+S   G  A  LFL  SS+    EG RG +C +
Sbjct: 169 DLASNQISCDSREGGVKATGLFLSTSSHVMTPEGRRGRKCEH 210


>BC038105-1|AAH38105.1|  576|Homo sapiens MPP7 protein protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525


>AL391423-2|CAI17344.1|  312|Homo sapiens novel protein protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 243 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 286


>AL391423-1|CAI17345.1|  576|Homo sapiens novel protein protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525


>AL390866-3|CAI12709.1|  312|Homo sapiens novel protein protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 243 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 286


>AL390866-2|CAI12708.1|  576|Homo sapiens novel protein protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525


>AL355501-2|CAI13640.1|  312|Homo sapiens novel protein protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 243 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 286


>AL355501-1|CAI13641.1|  576|Homo sapiens novel protein protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 153
           Y I + P  ++RL R + +NA ++  R+ QGA  P T  D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525


>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
          Length = 2157

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 7    EAIDIYNINVPPI*LQRLPRPSNRNAL-LLHGRNRQGAVVPTRADSQEVLPP 159
            + +D+Y    PP  L+ +P+P  R  L    G +R+     +R D +  LPP
Sbjct: 2104 QRVDLYQQASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRGDKEPGLPP 2155


>D86975-1|BAA13211.2| 1204|Homo sapiens KIAA0222 protein.
          Length = 1204

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 27   HKCATHIVTTAAPPFKPKRITASRQK*AGGGGTYPRGLTRGPT 155
            H    H   T  P  KP++  +S+   A GGG + R  T  PT
Sbjct: 933  HGQEPHGAATQGPLAKPRQEASSKPVPAPGGGGFSRSATPTPT 975


>BC108287-1|AAI08288.1|  516|Homo sapiens ZNF516 protein protein.
          Length = 516

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 27  HKCATHIVTTAAPPFKPKRITASRQK*AGGGGTYPRGLTRGPT 155
           H    H   T  P  KP++  +S+   A GGG + R  T  PT
Sbjct: 282 HGQEPHGAATQGPLAKPRQEASSKPVPAPGGGGFSRSATPTPT 324


>AK122601-1|BAC85488.1|  178|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16009 fis, clone NT2RI2003993. ).
          Length = 178

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 121 PPPPAYFCREAVMRFGLKGGAAVVTIWVAHLCC 23
           P PP  F     +R G   GA   T W AH+CC
Sbjct: 63  PRPPGRF-----LRMGSTRGAEPGTKWTAHVCC 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,850,320
Number of Sequences: 237096
Number of extensions: 788947
Number of successful extensions: 1538
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)